Protein Alignment Prosalpha6 and PBB1

DIOPT Version :10

• Sequence 1: NP_523532.1
• Gene: Prosalpha6 / 34359
• FlyBaseID: FBgn0250843
• Length: 279
• Species: Drosophila melanogaster
• Sequence 2: NP_566818.1
• Gene: PBB1 / 822364
• AraportID: AT3G27430
• Length: 273
• Species: Arabidopsis thaliana
• Alignment Length: 224
• Identity: 57/224 - (25%)
• Similarity: 91/224 - (40%)
• Gaps: 41/224 - (18%)

  Fly    29 VKLGTATVGLKNKDYAVLVALCKPTSE--LSDTQ-RKIIPIDDHLGISIAGLTADARVLSRYLRS 90
            :|.||..|||..||..:|.|..:.|..  ::|.. .||..:..::....||..||...::..:.|
plant    36 LKTGTTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSS 100

  Fly    91 ECLNYKHSYDTTYPVSRLITNLGNKMQTTTQRYDRRPYG---VGLLVAGYDERGPHIYQVTPSAT 152
            :.  ..|.|.|... ||:||.|     |..:::.....|   ..|::.|.|..|||::.:.|..:
plant   101 QL--RLHRYQTGRD-SRVITAL-----TLLKKHLFSYQGHVSAALVLGGVDITGPHLHTIYPHGS 157

  Fly   153 FFNCKANSIGSRSQSARTYLEKNLNKFLDSSKDEIIR-------HGIRAILGTLPTDEQGKDAGQ 210
            .......::||.|.:|.:..|....:.|  ::||.|:       .||...||:         ...
plant   158 TDTLPFATMGSGSLAAMSVFEAKYKEGL--TRDEGIKLVAESICSGIFNDLGS---------GSN 211

  Fly   211 YDITVAIVGKDQ---------PFTILSNK 230
            .||.|...|..:         |.|.:|:|
plant   212 VDICVITKGNKEYLRNYMEPNPRTYVSSK 240

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Prosalpha6	NP_523532.1	proteasome_alpha_type_1	6..219	CDD:239718	52/202 (26%)
PBB1	NP_566818.1	proteasome_beta_type_7	40..228	CDD:239732	51/206 (25%)