Protein Alignment Prosalpha6 and PBD1

DIOPT Version :10

• Sequence 1: NP_523532.1
• Gene: Prosalpha6 / 34359
• FlyBaseID: FBgn0250843
• Length: 279
• Species: Drosophila melanogaster
• Sequence 2: NP_188902.1
• Gene: PBD1 / 821834
• AraportID: AT3G22630
• Length: 204
• Species: Arabidopsis thaliana
• Alignment Length: 221
• Identity: 53/221 - (23%)
• Similarity: 87/221 - (39%)
• Gaps: 45/221 - (20%)

  Fly    26 MEAVKLGTATVGLKNKDYAVLVALCKPTSEL------SDTQRKIIPIDDHLGISIAGLTADARVL 84
            ||.|      .||....:|::.|   .||.:      .:.:.||:.:|.|..::.:|...|....
plant     1 MECV------FGLVGNGFAIVAA---DTSAVHSILLHKNNEDKIMVLDSHKLVAASGEPGDRVQF 56

  Fly    85 SRYLRSECLNYKHSYDTTYPV-SRLITNLGNKMQTTTQRYDRRPYGVGLLVAGY-DERGPHIYQV 147
            :.|::.....||  :....|: :....|.......|..|  :.||.|.:|:||| ||.|..:|.:
plant    57 TEYVQKNVSLYK--FRNGIPLTTAAAANFTRGELATALR--KNPYSVNILMAGYDDESGASLYYI 117

  Fly   148 TPSATFFNCKANSIGSRSQSARTYLEKNLNKFLDSSKDEIIR------HGIRAILGTLP------ 200
            ...||.......:.|..|..:.:.::::...  |.|.:|.|.      ..||:.|...|
plant   118 DYIATLHKVDKGAFGYGSYFSLSTMDRHYRS--DMSVEEAIELVDKCILEIRSRLVVAPPNFVIK 180

  Fly   201 -TDEQGKDAGQY-------DITVAIV 218
             .|:.|  |..|       |:|.|:|
plant   181 IVDKDG--ARDYAWRQSVKDVTTAVV 204

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Prosalpha6	NP_523532.1	proteasome_alpha_type_1	6..219	CDD:239718	53/221 (24%)
PBD1	NP_188902.1	proteasome_beta_type_2	1..192	CDD:239727	49/207 (24%)