DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha6 and PAE2

DIOPT Version :10

Sequence 1:NP_523532.1 Gene:Prosalpha6 / 34359 FlyBaseID:FBgn0250843 Length:279 Species:Drosophila melanogaster
Sequence 2:NP_188046.1 Gene:PAE2 / 820649 AraportID:AT3G14290 Length:237 Species:Arabidopsis thaliana


Alignment Length:199 Identity:81/199 - (40%)
Similarity:116/199 - (58%) Gaps:15/199 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MF--RNQYDSDVTVWSPQGRLHQVEYAMEAVKLGTATVGLKNKDYAVLVALCKPTSELSD--TQR 61
            ||  |.:||..|..:||:|||.|||||:||:|||:..:|:|.|:..||....:.||.|.:  :..
plant     1 MFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKEGVVLAVEKRITSPLLEPSSVE 65

  Fly    62 KIIPIDDHLGISIAGLTADARVLSRYLRSECLNYKHSY-------DTTYPVSRLITNLGNKMQTT 119
            ||:.||||:|.:::||.||||.|..:.|.|..|::.||       .||..:..|....|...:.:
plant    66 KIMEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGEEES 130

  Fly   120 TQRYDRRPYGVGLLVAGYDERGPHIYQVTPSATFFNCKANSIGSRSQSARTYLEKNLNKFLDSSK 184
            ..    ||:||.||:||:||.||.:|...||.||:.|.|.:|||.|:.|.:.|::..||.:...:
plant   131 MS----RPFGVSLLIAGHDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQFNKDITLQE 191

  Fly   185 DEII 188
            .|.|
plant   192 AETI 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha6NP_523532.1 proteasome_alpha_type_1 6..219 CDD:239718 78/192 (41%)
PAE2NP_188046.1 proteasome_alpha_type_5 8..218 CDD:239722 78/192 (41%)

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