DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha6 and PAA2

DIOPT Version :9

Sequence 1:NP_001285798.1 Gene:Prosalpha6 / 34359 FlyBaseID:FBgn0250843 Length:279 Species:Drosophila melanogaster
Sequence 2:NP_178641.1 Gene:PAA2 / 815135 AraportID:AT2G05840 Length:246 Species:Arabidopsis thaliana


Alignment Length:243 Identity:81/243 - (33%)
Similarity:125/243 - (51%) Gaps:10/243 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 YDSDVTVWSPQGRLHQVEYAMEAVK-LGTATVGLKNKDYAVLVALCKPTSELSD--TQRKIIPID 67
            ||..:|::||:|||.|||||.:||| .|..::|::.||...:|...|...:|.|  :...:.|:.
plant     9 YDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSVCVVTQKKVPDKLLDQSSVSHLFPVT 73

  Fly    68 DHLGISIAGLTADARVLSRYLRSECLNYKHSYDTTYPVSRLITNLGNKMQTTTQRYDRRPYGVGL 132
            .:||:...|:|||:|.|.:..|:|...::..|....|...|...:.:|.|..||....||.||..
plant    74 KYLGLLATGMTADSRSLVQQARNEAAEFRFQYGYEMPADILAKWIADKSQVYTQHAYMRPLGVVA 138

  Fly   133 LVAGYD-ERGPHIYQVTPSATFFNCKANSIGSRSQSARTYLEKNLNKFLDSSKDEIIRHGIRAIL 196
            :|.|.| ||||.:|:..|:..|:..||.|.|.:.|.|..:|||.:.:....:.||.::..|.|:.
plant   139 MVLGIDEERGPLLYKCDPAGHFYGHKATSAGMKEQEAVNFLEKKMKENPAFTYDETVQTAISALQ 203

  Fly   197 GTLPTDEQGKDAGQYDITVAIVGKDQP-FTILSNKDSAKHVAIAKEND 243
            ..|..|.:..     :|.|.:|..|.| |..|..::..:|:....|.|
plant   204 SVLQEDFKAT-----EIEVGVVRADDPLFRSLRTEEIDEHLTAISERD 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha6NP_001285798.1 PRE1 4..231 CDD:223711 78/229 (34%)
proteasome_alpha_type_1 6..219 CDD:239718 73/216 (34%)
PAA2NP_178641.1 proteasome_alpha_type_6 8..220 CDD:239723 73/215 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1222564at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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