DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha6 and PSMB8

DIOPT Version :10

Sequence 1:NP_523532.1 Gene:Prosalpha6 / 34359 FlyBaseID:FBgn0250843 Length:279 Species:Drosophila melanogaster
Sequence 2:NP_683720.2 Gene:PSMB8 / 5696 HGNCID:9545 Length:276 Species:Homo sapiens


Alignment Length:182 Identity:47/182 - (25%)
Similarity:80/182 - (43%) Gaps:22/182 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 QVEYAMEAVKLGTATVGLKNKDYAVLVALCKPTSELSDTQ----RKIIPIDDHLGISIAGLTADA 81
            |:|.|.     ||.|:..|.: :.|:.|:....|..|...    .|:|.|:.:|..:::|..||.
Human    66 QIEMAH-----GTTTLAFKFQ-HGVIAAVDSRASAGSYISALRVNKVIEINPYLLGTMSGCAADC 124

  Fly    82 RVLSRYLRSEC-LNYKHSYD--TTYPVSRLITNLGNKMQTTTQRYDRRPYGVGLLVAGYDERGPH 143
            :...|.|..|| |.|..:.:  :....|:|::|:       ..:|......:|.::.|:|::||.
Human   125 QYWERLLAKECRLYYLRNGERISVSAASKLLSNM-------MCQYRGMGLSMGSMICGWDKKGPG 182

  Fly   144 IYQVTPSATFFNCKANSIGSRSQSARTYLEKNLNKFLDSSKDEIIRHGIRAI 195
            :|.|....|..:....|.||.:..|...::......|  |.:|....|.|||
Human   183 LYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGYRPNL--SPEEAYDLGRRAI 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha6NP_523532.1 proteasome_alpha_type_1 6..219 CDD:239718 47/182 (26%)
PSMB8NP_683720.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..33
proteasome_beta_type_5 73..260 CDD:239730 43/170 (25%)
Blue background indicates that the domain is not in the aligned region.

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