DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha6 and PSMB5

DIOPT Version :9

Sequence 1:NP_001285798.1 Gene:Prosalpha6 / 34359 FlyBaseID:FBgn0250843 Length:279 Species:Drosophila melanogaster
Sequence 2:NP_002788.1 Gene:PSMB5 / 5693 HGNCID:9542 Length:263 Species:Homo sapiens


Alignment Length:156 Identity:39/156 - (25%)
Similarity:70/156 - (44%) Gaps:13/156 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 GTATVGLKNKDYAVLVALCKPTSE---LSDTQRKIIPIDDHLGISIAGLTADARVLSRYLRSECL 93
            ||.|:..|.:...::.|..:.|:.   .|.|.:|:|.|:.:|..::||..||.....|.|..:|.
Human    59 GTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCR 123

  Fly    94 NYKHSYDTTYPV---SRLITNLGNKMQTTTQRYDRRPYGVGLLVAGYDERGPHIYQVTPSATFFN 155
            .|:........|   |:|:.|:       ..:|......:|.::.|:|:|||.:|.|.......:
Human   124 IYELRNKERISVAAASKLLANM-------VYQYKGMGLSMGTMICGWDKRGPGLYYVDSEGNRIS 181

  Fly   156 CKANSIGSRSQSARTYLEKNLNKFLD 181
            ....|:||.|..|...:::..:..|:
Human   182 GATFSVGSGSVYAYGVMDRGYSYDLE 207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha6NP_001285798.1 PRE1 4..231 CDD:223711 39/156 (25%)
proteasome_alpha_type_1 6..219 CDD:239718 39/156 (25%)
PSMB5NP_002788.1 proteasome_beta_type_5 60..247 CDD:239730 38/155 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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