DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha6 and PSMB2

DIOPT Version :9

Sequence 1:NP_001285798.1 Gene:Prosalpha6 / 34359 FlyBaseID:FBgn0250843 Length:279 Species:Drosophila melanogaster
Sequence 2:NP_002785.1 Gene:PSMB2 / 5690 HGNCID:9539 Length:201 Species:Homo sapiens


Alignment Length:119 Identity:32/119 - (26%)
Similarity:57/119 - (47%) Gaps:16/119 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 VGLKNKDYAVLVALCKPTS----ELSDTQRKIIPIDDHLGISIAGLTADARVLSRYLRSECLNYK 96
            :|::..|| ||||..:..:    ::.|...|:..:.:.:.:...|...|....:.|::.....||
Human     5 IGIQGPDY-VLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKNVQLYK 68

  Fly    97 --HSYDTTYPVSRLIT--NLGNKMQTTTQRYDRRPYGVGLLVAGYDE-RGPHIY 145
              :.|:.:...:...|  ||.:.:::      |.||.|.||:||||| .||.:|
Human    69 MRNGYELSPTAAANFTRRNLADCLRS------RTPYHVNLLLAGYDEHEGPALY 116

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha6NP_001285798.1 PRE1 4..231 CDD:223711 32/119 (27%)
proteasome_alpha_type_1 6..219 CDD:239718 32/119 (27%)
PSMB2NP_002785.1 proteasome_beta_type_2 1..192 CDD:239727 32/119 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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