DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha6 and PSMB2

DIOPT Version :10

Sequence 1:NP_523532.1 Gene:Prosalpha6 / 34359 FlyBaseID:FBgn0250843 Length:279 Species:Drosophila melanogaster
Sequence 2:NP_002785.1 Gene:PSMB2 / 5690 HGNCID:9539 Length:201 Species:Homo sapiens


Alignment Length:119 Identity:32/119 - (26%)
Similarity:57/119 - (47%) Gaps:16/119 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 VGLKNKDYAVLVALCKPTS----ELSDTQRKIIPIDDHLGISIAGLTADARVLSRYLRSECLNYK 96
            :|::..|| ||||..:..:    ::.|...|:..:.:.:.:...|...|....:.|::.....||
Human     5 IGIQGPDY-VLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKNVQLYK 68

  Fly    97 --HSYDTTYPVSRLIT--NLGNKMQTTTQRYDRRPYGVGLLVAGYDE-RGPHIY 145
              :.|:.:...:...|  ||.:.:::      |.||.|.||:||||| .||.:|
Human    69 MRNGYELSPTAAANFTRRNLADCLRS------RTPYHVNLLLAGYDEHEGPALY 116

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha6NP_523532.1 proteasome_alpha_type_1 6..219 CDD:239718 32/119 (27%)
PSMB2NP_002785.1 proteasome_beta_type_2 1..192 CDD:239727 32/119 (27%)

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