DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha6 and PSMA2

DIOPT Version :9

Sequence 1:NP_001285798.1 Gene:Prosalpha6 / 34359 FlyBaseID:FBgn0250843 Length:279 Species:Drosophila melanogaster
Sequence 2:NP_002778.1 Gene:PSMA2 / 5683 HGNCID:9531 Length:234 Species:Homo sapiens


Alignment Length:208 Identity:68/208 - (32%)
Similarity:106/208 - (50%) Gaps:8/208 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFRNQYDSDVTVWSPQGRLHQVEYAMEAVKLGTATVGLKNKDYAVLVALCKPTSELSDTQ--RKI 63
            |....|...:|.:||.|:|.|:|||:.||..|..:||:|..:..||....|..|.|.|.:  .|:
Human     1 MAERGYSFSLTTFSPSGKLVQIEYALAAVAGGAPSVGIKAANGVVLATEKKQKSILYDERSVHKV 65

  Fly    64 IPIDDHLGISIAGLTADARVLSRYLRSECLNYKHSYDTTYPVSRLITNLGNKMQTTTQRYDRRPY 128
            .||..|:|:..:|:..|.|||....|.....|...|....|.::|:..:.:.||..||....||:
Human    66 EPITKHIGLVYSGMGPDYRVLVHRARKLAQQYYLVYQEPIPTAQLVQRVASVMQEYTQSGGVRPF 130

  Fly   129 GVGLLVAGYDERGPHIYQVTPSATFFNCKANSIGSRSQSARTYLEKNLNKFLDSSKDEIIRHGIR 193
            ||.||:.|::|..|:::|..||..:|..||.::|....:.:|:|||..|:.|:      :...|.
Human   131 GVSLLICGWNEGRPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRYNEDLE------LEDAIH 189

  Fly   194 AILGTLPTDEQGK 206
            ..:.||....:|:
Human   190 TAILTLKESFEGQ 202

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha6NP_001285798.1 PRE1 4..231 CDD:223711 67/205 (33%)
proteasome_alpha_type_1 6..219 CDD:239718 67/203 (33%)
PSMA2NP_002778.1 proteasome_alpha_type_2 6..231 CDD:239719 67/203 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1222564at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.920

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