DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha6 and PSMA1

DIOPT Version :10

Sequence 1:NP_523532.1 Gene:Prosalpha6 / 34359 FlyBaseID:FBgn0250843 Length:279 Species:Drosophila melanogaster
Sequence 2:NP_683877.1 Gene:PSMA1 / 5682 HGNCID:9530 Length:269 Species:Homo sapiens


Alignment Length:275 Identity:142/275 - (51%)
Similarity:201/275 - (73%) Gaps:23/275 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 FRNQYDSDVTVWSPQGRLHQVEYAMEAVKLGTATVGLKNKDYAVLVALCKPTSELSDTQRKIIPI 66
            ||||||:||||||||||:||:||||||||.|:||||||:|.:||||||.:..|||:..|:||:.:
Human     8 FRNQYDNDVTVWSPQGRIHQIEYAMEAVKQGSATVGLKSKTHAVLVALKRAQSELAAHQKKILHV 72

  Fly    67 DDHLGISIAGLTADARVLSRYLRSECLNYKHSYDTTYPVSRLITNLGNKMQTTTQRYDRRPYGVG 131
            |:|:||||||||||||:|..::|.|||:.:..:|...|||||::.:|:|.|..||||.|||||||
Human    73 DNHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGSKTQIPTQRYGRRPYGVG 137

  Fly   132 LLVAGYDERGPHIYQVTPSATFFNCKANSIGSRSQSARTYLEKNLNKFLDSSKDEIIRHGIRAIL 196
            ||:||||:.||||:|..|||.:|:|:|.|||:||||||||||:::::|::.:.:|:::||:||:.
Human   138 LLIAGYDDMGPHIFQTCPSANYFDCRAMSIGARSQSARTYLERHMSEFMECNLNELVKHGLRALR 202

  Fly   197 GTLPTDEQGKDAGQYDITVAIVGKDQPFTILSNKDSAKHVAIAKENDNDTPRNDDDDDRP----- 256
            .|||.::   |....::::.|||||..|||.             ::|:.:|..:..::||     
Human   203 ETLPAEQ---DLTTKNVSIGIVGKDLEFTIY-------------DDDDVSPFLEGLEERPQRKAQ 251

  Fly   257 --SPPEEPAAGPRDP 269
              .|.:|||....:|
Human   252 PAQPADEPAEKADEP 266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha6NP_523532.1 proteasome_alpha_type_1 6..219 CDD:239718 122/212 (58%)
PSMA1NP_683877.1 proteasome_alpha_type_1 12..222 CDD:239718 122/212 (58%)

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