DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha6 and psma1

DIOPT Version :9

Sequence 1:NP_001285798.1 Gene:Prosalpha6 / 34359 FlyBaseID:FBgn0250843 Length:279 Species:Drosophila melanogaster
Sequence 2:NP_001003427.1 Gene:psma1 / 445033 ZFINID:ZDB-GENE-040801-15 Length:262 Species:Danio rerio


Alignment Length:262 Identity:142/262 - (54%)
Similarity:193/262 - (73%) Gaps:3/262 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFRNQYDSDVTVWSPQGRLHQVEYAMEAVKLGTATVGLKNKDYAVLVALCKPTSELSDTQRKIIP 65
            |||||||:||||||||||:||:||||||||.|:||||||:..:||||||.:..|||:..|:||:.
Zfish     1 MFRNQYDNDVTVWSPQGRIHQIEYAMEAVKQGSATVGLKSHSHAVLVALKRAQSELAAHQKKILH 65

  Fly    66 IDDHLGISIAGLTADARVLSRYLRSECLNYKHSYDTTYPVSRLITNLGNKMQTTTQRYDRRPYGV 130
            :|:|:||||||||||||:|..::|.|||:.:..:|...|||||::.:|:|.|..||||.||||||
Zfish    66 VDNHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGSKTQIPTQRYGRRPYGV 130

  Fly   131 GLLVAGYDERGPHIYQVTPSATFFNCKANSIGSRSQSARTYLEKNLNKFLDSSKDEIIRHGIRAI 195
            |||:||||:.||||:|..|||.:|:|||.|||:||||||||||:::..|.|.:.:.:::||:||:
Zfish   131 GLLIAGYDDMGPHIFQTCPSANYFDCKAMSIGARSQSARTYLERHMEAFNDCNLNALVQHGLRAL 195

  Fly   196 LGTLPTDEQGKDAGQYDITVAIVGKDQPFTILSNKDSAKHVAIAKENDNDTPRNDDDDDRPSPPE 260
            ..|||.::   |....::::.|||||..|||..:.|.|..:...:|..........|:..|:.|:
Zfish   196 RETLPAEQ---DLTTKNVSIGIVGKDMEFTIYDDDDVATFLQGLEERPQRRVALPADEAAPAVPD 257

  Fly   261 EP 262
            ||
Zfish   258 EP 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha6NP_001285798.1 PRE1 4..231 CDD:223711 131/226 (58%)
proteasome_alpha_type_1 6..219 CDD:239718 122/212 (58%)
psma1NP_001003427.1 PRK03996 1..238 CDD:235192 136/239 (57%)
proteasome_alpha_type_1 6..216 CDD:239718 122/212 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170578450
Domainoid 1 1.000 215 1.000 Domainoid score I2658
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 290 1.000 Inparanoid score I2783
OMA 1 1.010 - - QHG53705
OrthoDB 1 1.010 - - D1222564at2759
OrthoFinder 1 1.000 - - FOG0003679
OrthoInspector 1 1.000 - - otm26455
orthoMCL 1 0.900 - - OOG6_102143
Panther 1 1.100 - - LDO PTHR11599
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1003
SonicParanoid 1 1.000 - - X2552
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1312.940

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