DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha6 and psma6b

DIOPT Version :9

Sequence 1:NP_001285798.1 Gene:Prosalpha6 / 34359 FlyBaseID:FBgn0250843 Length:279 Species:Drosophila melanogaster
Sequence 2:NP_001002589.1 Gene:psma6b / 436862 ZFINID:ZDB-GENE-040718-329 Length:246 Species:Danio rerio


Alignment Length:242 Identity:77/242 - (31%)
Similarity:126/242 - (52%) Gaps:8/242 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 YDSDVTVWSPQGRLHQVEYAMEAVKLGTAT-VGLKNKDYAVLVALCKPTSEL--SDTQRKIIPID 67
            :|..:|::||:|||:|||||.:|:..|..| |.::.||.|::|...|...:|  |.|...:..|.
Zfish     9 FDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAIVVTQKKVPDKLLDSSTVTHLFRIT 73

  Fly    68 DHLGISIAGLTADARVLSRYLRSECLNYKHSYDTTYPVSRLITNLGNKMQTTTQRYDRRPYGVGL 132
            :::|..::|:|||:|...:..|.|..|:|:.|....||..|...:.:..|..||..:.||.|..:
Zfish    74 ENIGCVMSGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIADISQVYTQNAEMRPLGCCM 138

  Fly   133 LVAGYDER-GPHIYQVTPSATFFNCKANSIGSRSQSARTYLEKNLNKFLDSSKDEIIRHGIRAIL 196
            :|.|.||. ||.:|:..|:..:...||.:.|.:...|.::|||.:.|.||.:.::.:...|..:.
Zfish   139 IVIGLDEELGPQVYKCDPAGYYCGFKATAAGVKQTEATSFLEKKVKKKLDWTFEQAVETAITCLT 203

  Fly   197 GTLPTDEQGKDAGQYDITVAIVGKDQPFTILSNKDSAKHVAIAKEND 243
            ..|..|.:   ..:.:|.| |..:|..|.|||..:...|:....|.|
Zfish   204 TVLSIDFK---PSELEIGV-ITAEDPKFRILSESEVDTHLVSLSERD 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha6NP_001285798.1 PRE1 4..231 CDD:223711 74/228 (32%)
proteasome_alpha_type_1 6..219 CDD:239718 69/216 (32%)
psma6bNP_001002589.1 PRE1 7..245 CDD:223711 75/239 (31%)
proteasome_alpha_type_6 8..220 CDD:239723 68/214 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1222564at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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