DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha6 and Prosbeta3

DIOPT Version :9

Sequence 1:NP_001285798.1 Gene:Prosalpha6 / 34359 FlyBaseID:FBgn0250843 Length:279 Species:Drosophila melanogaster
Sequence 2:NP_649858.1 Gene:Prosbeta3 / 41079 FlyBaseID:FBgn0026380 Length:205 Species:Drosophila melanogaster


Alignment Length:146 Identity:32/146 - (21%)
Similarity:57/146 - (39%) Gaps:40/146 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 GTATVGLKNKDYAVLVALCK------PTSELSDTQRKIIPIDDHLGISIAGLTADARVLSRYLRS 90
            |...|.::.||   .||:..      ....:|...:|:..|...:.:.:.||..|  :|:  :|.
  Fly     8 GGCVVAMRGKD---CVAIATDHRFGIQAQTISTDFKKVFHIGPRMFLGLTGLQTD--ILT--VRD 65

  Fly    91 ECLNYKHSYDT-------TYPVSRLITNLGNKMQTTTQRYDRR--PYGVGLLVAGYDERGPHIYQ 146
            ..:..|:.|:|       ..|.|.::::.         .|:.|  ||.:..:|||.|.:     .
  Fly    66 RLMFRKNLYETRENREMCPKPFSAMMSSF---------LYEHRFGPYFIEPVVAGLDPK-----T 116

  Fly   147 VTPSATFFNCKANSIG 162
            :.|    |.|..:.||
  Fly   117 MEP----FICNMDLIG 128

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha6NP_001285798.1 PRE1 4..231 CDD:223711 32/146 (22%)
proteasome_alpha_type_1 6..219 CDD:239718 32/146 (22%)
Prosbeta3NP_649858.1 proteasome_beta_type_3 6..201 CDD:239728 32/146 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45441146
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11599
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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