DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha6 and Prosbeta4R2

DIOPT Version :9

Sequence 1:NP_001285798.1 Gene:Prosalpha6 / 34359 FlyBaseID:FBgn0250843 Length:279 Species:Drosophila melanogaster
Sequence 2:NP_001259950.1 Gene:Prosbeta4R2 / 33451 FlyBaseID:FBgn0031443 Length:210 Species:Drosophila melanogaster


Alignment Length:131 Identity:32/131 - (24%)
Similarity:56/131 - (42%) Gaps:20/131 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 AMEAVKLGTATVGLKNKDYAVLVA---LCKPTSELSDTQRKIIPIDDHLGISIAGLTADARVLSR 86
            |||.:      :|:|..|:.:|.:   ..|....:.|.|.||..:.|...::..|...|....:.
  Fly     2 AMETI------LGIKGPDFVMLASDTMQAKSLVFMKDDQSKIHRLSDFNMMATVGDGGDTIQFTD 60

  Fly    87 YLRSECLNYK--HSYDTTYPVSRLIT--NLGNKMQTTTQRYDRRPYGVGLLVAGYDE-RGPHIYQ 146
            ::......||  |.|..:...:...|  .|.:.::|.|:      |.|.:|:||||. .||.::.
  Fly    61 FISKNLHLYKISHGYHLSAKSAAHFTRKTLADYIRTNTR------YQVAMLLAGYDAVEGPDLHY 119

  Fly   147 V 147
            :
  Fly   120 I 120

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha6NP_001285798.1 PRE1 4..231 CDD:223711 32/131 (24%)
proteasome_alpha_type_1 6..219 CDD:239718 32/131 (24%)
Prosbeta4R2NP_001259950.1 PRE1 1..194 CDD:223711 32/131 (24%)
proteasome_beta_type_2 3..194 CDD:239727 31/130 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45441118
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11599
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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