DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha6 and psmb8a

DIOPT Version :9

Sequence 1:NP_001285798.1 Gene:Prosalpha6 / 34359 FlyBaseID:FBgn0250843 Length:279 Species:Drosophila melanogaster
Sequence 2:NP_571467.3 Gene:psmb8a / 30666 ZFINID:ZDB-GENE-990415-141 Length:271 Species:Danio rerio


Alignment Length:168 Identity:44/168 - (26%)
Similarity:72/168 - (42%) Gaps:11/168 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 GTATVGLKNKDYAVLVALCKPTSE----LSDTQRKIIPIDDHLGISIAGLTADARVLSRYLRSEC 92
            ||.|:..|.: :.|:||:....|.    .|....|:|.|:.:|..:::|..||.:...|.|..||
Zfish    67 GTTTLAFKFR-HGVIVAVDSRASAGKYIASKEANKVIEINPYLLGTMSGSAADCQYWERLLAKEC 130

  Fly    93 LNYKHSYDTTYPVSRLITNLGNKMQTTTQRYDRRPYGVGLLVAGYDERGPHIYQVTPSATFFNCK 157
            ..||........||.....|.|.|    ..|......:|.::.|:|::||.:|.|..:.|..:.:
Zfish   131 RLYKLRNKQRISVSAASKLLSNMM----LGYRGMGLSMGSMICGWDKQGPGLYYVDDNGTRLSGR 191

  Fly   158 ANSIGSRSQSARTYLEKNLNKFLDSSKDEIIRHGIRAI 195
            ..|.|..:..|...::....:  |.:.:|....|.|.|
Zfish   192 MFSTGCGNSYAYGVVDSGYRE--DMTVEEAYELGRRGI 227

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha6NP_001285798.1 PRE1 4..231 CDD:223711 44/168 (26%)
proteasome_alpha_type_1 6..219 CDD:239718 44/168 (26%)
psmb8aNP_571467.3 PTZ00488 37..266 CDD:185666 44/168 (26%)
proteasome_beta_type_5 68..255 CDD:239730 43/167 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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