DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha6 and psmb5

DIOPT Version :9

Sequence 1:NP_001285798.1 Gene:Prosalpha6 / 34359 FlyBaseID:FBgn0250843 Length:279 Species:Drosophila melanogaster
Sequence 2:NP_571226.1 Gene:psmb5 / 30387 ZFINID:ZDB-GENE-990415-215 Length:269 Species:Danio rerio


Alignment Length:171 Identity:47/171 - (27%)
Similarity:75/171 - (43%) Gaps:17/171 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 GTATVGLKNKDYAVLVALCKPTSE----LSDTQRKIIPIDDHLGISIAGLTADARVLSRYLRSEC 92
            ||.|:..|.: :.|:||:....:.    .|.|.:|:|.|:.:|..::||..||.....|.|..:|
Zfish    65 GTTTLAFKFQ-HGVIVAVDSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQC 128

  Fly    93 LNYKHSYDTTYPV---SRLITNLGNKMQTTTQRYDRRPYGVGLLVAGYDERGPHIYQVTPSATFF 154
            ..|:........|   |:|:.|:       ..:|......:|.:|.|:|:|||.:|.|.......
Zfish   129 RIYELRNKERISVAAASKLLANM-------VYQYKGMGLSMGTMVCGWDKRGPGLYYVDSEGNRV 186

  Fly   155 NCKANSIGSRSQSARTYLEKNLNKFLDSSKDEIIRHGIRAI 195
            .....::||.|..|...::..|.  .|.:.||....|.|||
Zfish   187 CGGLFAVGSGSMYAYGVVDSGLR--YDLTIDEACDLGRRAI 225

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha6NP_001285798.1 PRE1 4..231 CDD:223711 47/171 (27%)
proteasome_alpha_type_1 6..219 CDD:239718 47/171 (27%)
psmb5NP_571226.1 PTZ00488 44..268 CDD:185666 47/171 (27%)
proteasome_beta_type_5 66..253 CDD:239730 46/170 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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