DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha6 and Psma1

DIOPT Version :9

Sequence 1:NP_001285798.1 Gene:Prosalpha6 / 34359 FlyBaseID:FBgn0250843 Length:279 Species:Drosophila melanogaster
Sequence 2:NP_058974.1 Gene:Psma1 / 29668 RGDID:61841 Length:263 Species:Rattus norvegicus


Alignment Length:269 Identity:141/269 - (52%)
Similarity:199/269 - (73%) Gaps:16/269 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFRNQYDSDVTVWSPQGRLHQVEYAMEAVKLGTATVGLKNKDYAVLVALCKPTSELSDTQRKIIP 65
            |||||||:||||||||||:||:||||||||.|:||||||:|.:||||||.:..|||:..|:||:.
  Rat     1 MFRNQYDNDVTVWSPQGRIHQIEYAMEAVKQGSATVGLKSKTHAVLVALKRAQSELAAHQKKILH 65

  Fly    66 IDDHLGISIAGLTADARVLSRYLRSECLNYKHSYDTTYPVSRLITNLGNKMQTTTQRYDRRPYGV 130
            :|:|:||||||||||||:|..::|.|||:.:..:|...|||||::.:|:|.|..||||.||||||
  Rat    66 VDNHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGSKTQIPTQRYGRRPYGV 130

  Fly   131 GLLVAGYDERGPHIYQVTPSATFFNCKANSIGSRSQSARTYLEKNLNKFLDSSKDEIIRHGIRAI 195
            |||:||||:.|||::|..|||.:|:|:|.|||:||||||||||:::::|:..:.||:::||:||:
  Rat   131 GLLIAGYDDMGPHVFQTCPSANYFDCRAMSIGARSQSARTYLERHMSEFMQCNLDELVKHGLRAL 195

  Fly   196 LGTLPTDEQGKDAGQYDITVAIVGKDQPFTILSNKDSAKHVAIAKENDNDTPRNDDDDDRPSPPE 260
            ..|||.::   |....::::.|||||..|||.             ::|:.:|..|..::||....
  Rat   196 RETLPAEQ---DLTTKNVSIGIVGKDLEFTIY-------------DDDDVSPFLDGLEERPQRKA 244

  Fly   261 EPAAGPRDP 269
            :|:....:|
  Rat   245 QPSQAADEP 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha6NP_001285798.1 PRE1 4..231 CDD:223711 131/226 (58%)
proteasome_alpha_type_1 6..219 CDD:239718 122/212 (58%)
Psma1NP_058974.1 proteasome_alpha_type_1 6..216 CDD:239718 122/212 (58%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 232..263 5/22 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166338839
Domainoid 1 1.000 217 1.000 Domainoid score I2597
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 290 1.000 Inparanoid score I2712
OMA 1 1.010 - - QHG53705
OrthoDB 1 1.010 - - D1222564at2759
OrthoFinder 1 1.000 - - FOG0003679
OrthoInspector 1 1.000 - - otm45795
orthoMCL 1 0.900 - - OOG6_102143
Panther 1 1.100 - - LDO PTHR11599
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2552
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.770

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