DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prosalpha6 and Psma7

DIOPT Version :10

Sequence 1:NP_523532.1 Gene:Prosalpha6 / 34359 FlyBaseID:FBgn0250843 Length:279 Species:Drosophila melanogaster
Sequence 2:NP_036099.1 Gene:Psma7 / 26444 MGIID:1347070 Length:248 Species:Mus musculus


Alignment Length:244 Identity:92/244 - (37%)
Similarity:141/244 - (57%) Gaps:11/244 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 YDSDVTVWSPQGRLHQVEYAMEAVKLGTATVGLKNKDYAVLVALCKPTSELSD--TQRKIIPIDD 68
            ||..:||:||.|.|.|||||.||||.|:..||::.||..||....|..::|.|  |.|||..:||
Mouse     3 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGKDIVVLGVEKKSVAKLQDERTVRKICALDD 67

  Fly    69 HLGISIAGLTADARVLSRYLRSECLNYKHSYDTTYPVSRLITNLGNKMQTTTQRYDRRPYGVGLL 133
            ::.::.||||||||::....|.||.:::.:.:....|..:...:.:..|..||...|||:|:..|
Mouse    68 NVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISAL 132

  Fly   134 VAGYDERG-PHIYQVTPSATFFNCKANSIGSRSQSARTYLEKNLNKFLDSSKDEIIRHGIRAILG 197
            :.|:|..| |.:||..||.|:...|||:||..::|.|.:||||.......:.|..|:..|:|:|.
Mouse   133 IVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDDAIETDDLTIKLVIKALLE 197

  Fly   198 TLPTDEQGKDAGQYDITVAIVGKDQPFTILSNKDSAKHVA-IAKENDND 245
            .:       .:|..:|.:|::.:|||..||:.::..|:|| |.||.:.:
Mouse   198 VV-------QSGGKNIELAVMRRDQPLKILNPEEIEKYVAEIEKEKEEN 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha6NP_523532.1 proteasome_alpha_type_1 6..219 CDD:239718 81/215 (38%)
Psma7NP_036099.1 proteasome_alpha_type_7 3..211 CDD:239724 81/214 (38%)

Return to query results.
Submit another query.