DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha6 and Psma7

DIOPT Version :9

Sequence 1:NP_001285798.1 Gene:Prosalpha6 / 34359 FlyBaseID:FBgn0250843 Length:279 Species:Drosophila melanogaster
Sequence 2:NP_036099.1 Gene:Psma7 / 26444 MGIID:1347070 Length:248 Species:Mus musculus


Alignment Length:244 Identity:92/244 - (37%)
Similarity:141/244 - (57%) Gaps:11/244 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 YDSDVTVWSPQGRLHQVEYAMEAVKLGTATVGLKNKDYAVLVALCKPTSELSD--TQRKIIPIDD 68
            ||..:||:||.|.|.|||||.||||.|:..||::.||..||....|..::|.|  |.|||..:||
Mouse     3 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGKDIVVLGVEKKSVAKLQDERTVRKICALDD 67

  Fly    69 HLGISIAGLTADARVLSRYLRSECLNYKHSYDTTYPVSRLITNLGNKMQTTTQRYDRRPYGVGLL 133
            ::.::.||||||||::....|.||.:::.:.:....|..:...:.:..|..||...|||:|:..|
Mouse    68 NVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISAL 132

  Fly   134 VAGYDERG-PHIYQVTPSATFFNCKANSIGSRSQSARTYLEKNLNKFLDSSKDEIIRHGIRAILG 197
            :.|:|..| |.:||..||.|:...|||:||..::|.|.:||||.......:.|..|:..|:|:|.
Mouse   133 IVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDDAIETDDLTIKLVIKALLE 197

  Fly   198 TLPTDEQGKDAGQYDITVAIVGKDQPFTILSNKDSAKHVA-IAKENDND 245
            .:       .:|..:|.:|::.:|||..||:.::..|:|| |.||.:.:
Mouse   198 VV-------QSGGKNIELAVMRRDQPLKILNPEEIEKYVAEIEKEKEEN 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha6NP_001285798.1 PRE1 4..231 CDD:223711 86/227 (38%)
proteasome_alpha_type_1 6..219 CDD:239718 81/215 (38%)
Psma7NP_036099.1 proteasome_alpha_type_7 3..211 CDD:239724 81/214 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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