DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha6 and Psma5

DIOPT Version :9

Sequence 1:NP_001285798.1 Gene:Prosalpha6 / 34359 FlyBaseID:FBgn0250843 Length:279 Species:Drosophila melanogaster
Sequence 2:NP_036097.1 Gene:Psma5 / 26442 MGIID:1347009 Length:241 Species:Mus musculus


Alignment Length:242 Identity:81/242 - (33%)
Similarity:133/242 - (54%) Gaps:20/242 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MF--RNQYDSDVTVWSPQGRLHQVEYAMEAVKLGTATVGLKNKDYAVLVALCKPTSELSDTQ--R 61
            ||  |::||..|..:||:|||.|||||:||:|||:..:|::..:...|....:.||.|.:..  .
Mouse     1 MFLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPSSIE 65

  Fly    62 KIIPIDDHLGISIAGLTADARVLSRYLRSECLNYKHSYD---TTYPVSRLITNLGNKMQTTTQRY 123
            ||:.||.|:|.:::||.|||:.|....|.|..|:..:|:   |...|::.::||.  :|...:..
Mouse    66 KIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLA--LQFGEEDA 128

  Fly   124 D----RRPYGVGLLVAGYDERGPHIYQVTPSATFFNCKANSIGSRSQSARTYLEKNLNKFLDSSK 184
            |    .||:||.||..|.||:||.::.:.||.||..|.|.:|||.|:.|::.|::..:|.:    
Mouse   129 DPGAMSRPFGVALLFGGVDEKGPQLFHMDPSGTFVQCDARAIGSASEGAQSSLQEVYHKSM---- 189

  Fly   185 DEIIRHGIRAILGTLPTDEQGKDAGQYDITVAIVGKDQPFTILSNKD 231
              .::..|::.|..|....:.| ....:|.:|.|...|.|.:.:.::
Mouse   190 --TLKEAIKSSLIILKQVMEEK-LNATNIELATVQPGQNFHMFTKEE 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha6NP_001285798.1 PRE1 4..231 CDD:223711 78/235 (33%)
proteasome_alpha_type_1 6..219 CDD:239718 75/221 (34%)
Psma5NP_036097.1 proteasome_alpha_type_5 8..220 CDD:239722 75/220 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1222564at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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