DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha6 and Psma4

DIOPT Version :10

Sequence 1:NP_523532.1 Gene:Prosalpha6 / 34359 FlyBaseID:FBgn0250843 Length:279 Species:Drosophila melanogaster
Sequence 2:NP_036096.1 Gene:Psma4 / 26441 MGIID:1347060 Length:261 Species:Mus musculus


Alignment Length:269 Identity:86/269 - (31%)
Similarity:124/269 - (46%) Gaps:34/269 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 QYDSDVTVWSPQGRLHQVEYAMEAVKLGTATVGLKNKDYAVLVALCKPTSELSDT---QRKIIPI 66
            :|||..|::||:|||:||||||||:......:|:...|..:|.|..:...:|.|.   ..||..:
Mouse     4 RYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKL 68

  Fly    67 DDHLGISIAGLTADARVLSRYLRSECLNYKHSYDTTYPVSRLITNLGNKMQTTTQRYDRRPYGVG 131
            ::.:..|:||:|:||.||:..||.....|...|....|..:|:|.|.:..|..||...:||:||.
Mouse    69 NEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVS 133

  Fly   132 LLVAGYDER-GPHIYQVTPSATFFNCKANSIGSRSQSARTYLE------------------KNLN 177
            ||..|:|:. |..:||..||..:...||..||:.|.:|.:.|:                  |.||
Mouse   134 LLYIGWDKHYGFQLYQSDPSGNYGGWKATCIGNNSAAAVSMLKQDYKEGEMTLKSALALAVKVLN 198

  Fly   178 KFLDSSKDEIIRHGIRAILGTLPTDEQGKDAGQYDITVAIVGKDQPFTILSNKDSAKHVAIAKEN 242
            |.:|.||    ....:..:.|| |.|.||       ||..|.|.:....|..|...:.....:|.
Mouse   199 KTMDVSK----LSAEKVEIATL-TRESGK-------TVIRVLKQKEVEQLIKKHEEEEAKAEREK 251

  Fly   243 DNDTPRNDD 251
            .....|..|
Mouse   252 KEKEQREKD 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha6NP_523532.1 proteasome_alpha_type_1 6..219 CDD:239718 79/234 (34%)
Psma4NP_036096.1 proteasome_alpha_type_4 3..216 CDD:239721 71/215 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 240..261 3/21 (14%)

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