DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha6 and Psma1

DIOPT Version :10

Sequence 1:NP_523532.1 Gene:Prosalpha6 / 34359 FlyBaseID:FBgn0250843 Length:279 Species:Drosophila melanogaster
Sequence 2:NP_036095.1 Gene:Psma1 / 26440 MGIID:1347005 Length:263 Species:Mus musculus


Alignment Length:269 Identity:142/269 - (52%)
Similarity:200/269 - (74%) Gaps:16/269 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFRNQYDSDVTVWSPQGRLHQVEYAMEAVKLGTATVGLKNKDYAVLVALCKPTSELSDTQRKIIP 65
            |||||||:||||||||||:||:||||||||.|:||||||:|.:||||||.:..|||:..|:||:.
Mouse     1 MFRNQYDNDVTVWSPQGRIHQIEYAMEAVKQGSATVGLKSKTHAVLVALKRAQSELAAHQKKILH 65

  Fly    66 IDDHLGISIAGLTADARVLSRYLRSECLNYKHSYDTTYPVSRLITNLGNKMQTTTQRYDRRPYGV 130
            :|:|:||||||||||||:|..::|.|||:.:..:|...|||||::.:|:|.|..||||.||||||
Mouse    66 VDNHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGSKTQIPTQRYGRRPYGV 130

  Fly   131 GLLVAGYDERGPHIYQVTPSATFFNCKANSIGSRSQSARTYLEKNLNKFLDSSKDEIIRHGIRAI 195
            |||:||||:.||||:|..|||.:|:|:|.|||:||||||||||:::::|::.:.||:::||:||:
Mouse   131 GLLIAGYDDMGPHIFQTCPSANYFDCRAMSIGARSQSARTYLERHMSEFMECNLDELVKHGLRAL 195

  Fly   196 LGTLPTDEQGKDAGQYDITVAIVGKDQPFTILSNKDSAKHVAIAKENDNDTPRNDDDDDRPSPPE 260
            ..|||.::   |....::::.|||||..|||.             ::|:.:|..|..::||....
Mouse   196 RETLPAEQ---DLTTKNVSIGIVGKDLEFTIY-------------DDDDVSPFLDGLEERPQRKA 244

  Fly   261 EPAAGPRDP 269
            :|:....:|
Mouse   245 QPSQAAEEP 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha6NP_523532.1 proteasome_alpha_type_1 6..219 CDD:239718 123/212 (58%)
Psma1NP_036095.1 proteasome_alpha_type_1 6..216 CDD:239718 123/212 (58%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 232..263 5/22 (23%)

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