DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha6 and Psma3

DIOPT Version :10

Sequence 1:NP_523532.1 Gene:Prosalpha6 / 34359 FlyBaseID:FBgn0250843 Length:279 Species:Drosophila melanogaster
Sequence 2:NP_035314.3 Gene:Psma3 / 19167 MGIID:104883 Length:255 Species:Mus musculus


Alignment Length:262 Identity:70/262 - (26%)
Similarity:127/262 - (48%) Gaps:29/262 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 YDSDVTVWSPQGRLHQVEYAMEAVKLGTATVGLKNKDYAVL----VALCKPTSELSDTQRKIIPI 66
            ||...:.:||.||:.||||||:||:..:..:|::.||..|.    :.|.|...|.|:  :::..:
Mouse     8 YDLSASTFSPDGRVFQVEYAMKAVENSSTAIGIRCKDGVVFGVEKLVLSKLYEEGSN--KRLFNV 70

  Fly    67 DDHLGISIAGLTADARVLSRYLRSECLNYKHSYDTTYPVSRLITNLGNKMQTTTQRYDRRPYGVG 131
            |.|:|:::|||.||||.|:...|.|..|::.::....|:..|...:...:...|.....||:|..
Mouse    71 DRHVGMAVAGLLADARSLADIAREEASNFRSNFGYNIPLKHLADRVAMYVHAYTLYSAVRPFGCS 135

  Fly   132 LLVAGYDER-GPHIYQVTPSATFFNCKANSIGSRSQSARTYLEKNLNKFLDSSKDEIIRHGIRAI 195
            .::..|... |..:|.:.||...:.....:||...|:|:|.:||...|  :.:..::::...:.|
Mouse   136 FMLGSYSANDGAQLYMIDPSGVSYGYWGCAIGKARQAAKTEIEKLQMK--EMTCRDVVKEVAKII 198

  Fly   196 LGTLPTDEQGKDAGQYDITVA---------IVGKDQPFTILSNKDSAKHVAIAKENDNDTPRNDD 251
            .  :..||....|.:.:::..         ||.||      ..:::.|:   |||:..:...:||
Mouse   199 Y--IVHDEVKDKAFELELSWVGELTKGRHEIVPKD------IREEAEKY---AKESLKEEDESDD 252

  Fly   252 DD 253
            |:
Mouse   253 DN 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha6NP_523532.1 proteasome_alpha_type_1 6..219 CDD:239718 60/226 (27%)
Psma3NP_035314.3 proteasome_alpha_type_3 5..217 CDD:239720 59/214 (28%)

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