DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha6 and pbs-6

DIOPT Version :9

Sequence 1:NP_001285798.1 Gene:Prosalpha6 / 34359 FlyBaseID:FBgn0250843 Length:279 Species:Drosophila melanogaster
Sequence 2:NP_498806.1 Gene:pbs-6 / 176161 WormBaseID:WBGene00003952 Length:258 Species:Caenorhabditis elegans


Alignment Length:175 Identity:42/175 - (24%)
Similarity:69/175 - (39%) Gaps:31/175 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 WSPQGRLHQVEYAMEAVKLGTATVGLKNKDYAVLVALCKPTSE----LSDTQRKIIPIDDHLGIS 73
            |:|        |:||    |.:|..:..:::|::.:..:.|..    |:....||..::|::.::
 Worm    44 WNP--------YSME----GGSTCAISGENFAIVASDTRMTQNDINILTRDAEKIQILNDNIILT 96

  Fly    74 IAGLTADARVLSRYLRSECLNYKHSYDTTYPVSRLITNLGNKMQTTTQRYDRR--PYGVGLLVAG 136
            .:|...|...|.:.|:|....|:..|.:...|......|...:      |.||  ||..|.::||
 Worm    97 TSGFYGDVLQLKKVLQSRLHKYRFDYRSDMSVDLCAELLSRNL------YYRRFFPYYTGAILAG 155

  Fly   137 YDERGPHIYQVTPSATFFNCKANSIGSRSQSARTYLEKNLNKFLD 181
            .||.|       ..|.|.......|.....||....|..:..|||
 Worm   156 IDEHG-------KGAVFSYDPIGCIERLGYSASGAAEPMIIPFLD 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha6NP_001285798.1 PRE1 4..231 CDD:223711 42/175 (24%)
proteasome_alpha_type_1 6..219 CDD:239718 42/175 (24%)
pbs-6NP_498806.1 PRE1 38..246 CDD:223711 42/175 (24%)
Ntn_hydrolase 44..258 CDD:294319 42/175 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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