Protein Alignment Prosalpha6 and pbs-3

DIOPT Version :10

• Sequence 1: NP_523532.1
• Gene: Prosalpha6 / 34359
• FlyBaseID: FBgn0250843
• Length: 279
• Species: Drosophila melanogaster
• Sequence 2: NP_494913.1
• Gene: pbs-3 / 173858
• WormBaseID: WBGene00003949
• Length: 204
• Species: Caenorhabditis elegans
• Alignment Length: 199
• Identity: 49/199 - (24%)
• Similarity: 76/199 - (38%)
• Gaps: 51/199 - (25%)

  Fly    42 DYAVLVA----LCKPTSELSDTQRKIIPIDDHLGISIAGLTADAR-VLSR-------YLRSECLN 94
            |..|.:|    :.:..:.::..|:|:..:.|.:.:.:||..:||| ||.:       |...|..|
 Worm    17 DECVCIASDLRIGEQMTTIATDQKKVHKVTDKVYVGLAGFQSDARTVLEKIMFRKNLYELRENRN 81

  Fly    95 YKHSYDTTYPVSRLITNLGNKMQTTTQRYDRR--PYGVGLLVAGYDERG-PHIYQVTPSATFFNC 156
            .|...     :|.:|:||.         |..|  .|....||||.|:.. |:|           |
 Worm    82 IKPQV-----LSEMISNLA---------YQHRFGSYFTEPLVAGLDDTNKPYI-----------C 121

  Fly   157 KANSIGSRSQ--------SARTYLEKNLNKFL--DSSKDEIIRHGIRAILGTLPTD-EQGKDAGQ 210
            ..::||..|.        :.:.||......|.  :...||:.....::||..|..| ..|..|..
 Worm   122 CMDTIGCVSAPRDFVAVGTGQEYLLGVCENFWRENMKPDELFEATAQSILSCLERDAASGWGAVV 186

  Fly   211 YDIT 214
            |.||
 Worm   187 YTIT 190

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Prosalpha6	NP_523532.1	proteasome_alpha_type_1	6..219	CDD:239718	49/199 (25%)
pbs-3	NP_494913.1	proteasome_beta_type_3	6..200	CDD:239728	49/199 (25%)