DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha6 and Psmb8

DIOPT Version :10

Sequence 1:NP_523532.1 Gene:Prosalpha6 / 34359 FlyBaseID:FBgn0250843 Length:279 Species:Drosophila melanogaster
Sequence 2:NP_034854.2 Gene:Psmb8 / 16913 MGIID:1346527 Length:276 Species:Mus musculus


Alignment Length:187 Identity:50/187 - (26%)
Similarity:88/187 - (47%) Gaps:22/187 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 QGRLHQVEYAMEAVKLGTATVGLKNKDYAVLVAL---CKPTSELSDTQ-RKIIPIDDHLGISIAG 76
            |.|..|:|.|.     ||.|:..|.: :.|:||:   ....|.:|..: .|:|.|:.:|..:::|
Mouse    61 QERNVQIEMAH-----GTTTLAFKFQ-HGVIVAVDSRATAGSYISSLRMNKVIEINPYLLGTMSG 119

  Fly    77 LTADARVLSRYLRSEC-LNYKHSYD--TTYPVSRLITNLGNKMQTTTQRYDRRPYGVGLLVAGYD 138
            ..||.:...|.|..|| |.|..:.:  :....|:|::|:       ..:|......:|.::.|:|
Mouse   120 CAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNM-------MLQYRGMGLSMGSMICGWD 177

  Fly   139 ERGPHIYQVTPSATFFNCKANSIGSRSQSARTYLEKNLNKFLDSSKDEIIRHGIRAI 195
            ::||.:|.|..:.|..:.:..|.||.:..|...::....:  |.|.:|....|.|||
Mouse   178 KKGPGLYYVDDNGTRLSGQMFSTGSGNTYAYGVMDSGYRQ--DLSPEEAYDLGRRAI 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha6NP_523532.1 proteasome_alpha_type_1 6..219 CDD:239718 50/187 (27%)
Psmb8NP_034854.2 proteasome_beta_type_5 73..260 CDD:239730 44/170 (26%)

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