| Sequence 1: | NP_001188769.1 | Gene: | Npc1a / 34358 | FlyBaseID: | FBgn0024320 | Length: | 1287 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001022051.1 | Gene: | scp-1 / 174479 | WormBaseID: | WBGene00004744 | Length: | 1087 | Species: | Caenorhabditis elegans |
| Alignment Length: | 628 | Identity: | 116/628 - (18%) |
|---|---|---|---|
| Similarity: | 228/628 - (36%) | Gaps: | 130/628 - (20%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 345 WGTYFASNPGLTLIAGASLVVILGY-GINFIEI-TTDPVKLWASPNSKSRLEREFFDTKFSPFYR 407
Fly 408 LEQIIIKAVNLPQIVHNTSNGPYTFGPVFDREFLTKVLDLQEGIKEINANGTQLKDIC--YAPLS 470
Fly 471 DDGS--EIDVSQCVV---QSIWGYFGDDRERLDDHDEDNGFNVTYLDALYDCISNPYLCLAP--Y 528
Fly 529 GGPVDPAIALGGFLPPGDQLTGSTKFELANAIILTFLVKNHHNKTDLENALTWEKKFVEF-MTNY 592
Fly 593 TKNNMSQYMDIAFTSERSIEDELNRESQSDVLTILVSYLIMFMYIAISLGHVKEFKRVFIDSKIT 657
Fly 658 LGIGGVIIVLASVVSSVGVFGYIGLPATLIIVEVIPFLVLAVGVDNIFILVQTHQRDQRKPNETL 722
Fly 723 EQQVGRILGKVGPSMLLTSLSESFCFFLGGLSDMPAVRAFALYAGVALIIDFLLQITCFVSLFTL 787
Fly 788 DTKR-------------------REENRMDICC---------FIKGKKPDSITSNEG-------- 816
Fly 817 -----LLYKFFSS-----VYVP------------FLMK-KIVRASVMVIFFAWLCFSIAIAPRID 858
Fly 859 IGLDQELAMPQDSFVLHYFQSLN-ENLNIG----------PPV 890 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Npc1a | NP_001188769.1 | NPC1_N | 31..274 | CDD:293023 | |
| 2A060601 | 33..1261 | CDD:273337 | 116/628 (18%) | ||
| Sterol-sensing | 651..804 | CDD:289145 | 30/180 (17%) | ||
| scp-1 | NP_001022051.1 | Sterol-sensing | 295..448 | CDD:289145 | 26/154 (17%) |
| WD40 | <727..1043 | CDD:225201 | |||
| WD40 | 727..959 | CDD:295369 | |||
| WD40 repeat | 735..770 | CDD:293791 | |||
| WD40 repeat | 791..826 | CDD:293791 | |||
| WD40 repeat | 833..875 | CDD:293791 | |||
| WD40 repeat | 883..919 | CDD:293791 | |||
| WD40 repeat | 926..949 | CDD:293791 | |||
| WD40 repeat | 967..1005 | CDD:293791 | |||
| WD40 repeat | 1016..1040 | CDD:293791 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.910 | |||||