Sequence 1: | NP_001188769.1 | Gene: | Npc1a / 34358 | FlyBaseID: | FBgn0024320 | Length: | 1287 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001120162.1 | Gene: | scap / 100145201 | XenbaseID: | XB-GENE-996521 | Length: | 1319 | Species: | Xenopus tropicalis |
Alignment Length: | 498 | Identity: | 101/498 - (20%) |
---|---|---|---|
Similarity: | 195/498 - (39%) | Gaps: | 112/498 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 342 FTKWGTYFASNPGLTLIAGASLVVILGY--------GINFIEITTDPVKLWA----SPNSKSRLE 394
Fly 395 REFFDTKFSPFYRLEQIIIKAVNLPQIVHNTSNGPYTFGPVFDREF---------LTKVLDLQEG 450
Fly 451 IK----EINANGTQLKDIC---------YAPLSDDGSEIDVSQCVVQSIWGYFGDDRER------ 496
Fly 497 ----LDDHDEDN-GFNVTYLDALYDCISNPYLCLAPYGGPVDPAIALGGFLPPGDQLTGSTKFEL 556
Fly 557 ANAIILTFLVKNHHNKTDLENALTWEKKFVEFMTNYTKNNMSQY-MDIAFTSERSIEDELNRESQ 620
Fly 621 SDVLTILVSYLIMFMYIAISLGHVKEFKRVFIDSKITLGIGGVIIVLASVVSSVGVFGYIGLPAT 685
Fly 686 LIIVEVIPFLVLAVGVDNIFILVQTHQRDQRKPNETLEQQVGRILGKVGPSMLLTSLSESFCFFL 750
Fly 751 GGLSDMPAVRAFALYAGVALIIDFLLQITCFVSLFTLDTKRRE 793 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Npc1a | NP_001188769.1 | NPC1_N | 31..274 | CDD:293023 | |
2A060601 | 33..1261 | CDD:273337 | 101/498 (20%) | ||
Sterol-sensing | 651..804 | CDD:289145 | 40/143 (28%) | ||
scap | NP_001120162.1 | 2A060601 | <11..>446 | CDD:273337 | 100/496 (20%) |
Sterol-sensing | 306..452 | CDD:372063 | 40/143 (28%) | ||
WD40 | 795..826 | CDD:197651 | |||
WD40 | <993..1195 | CDD:225201 | |||
WD40 repeat | 1050..1086 | CDD:293791 | |||
WD40 | 1118..>1275 | CDD:392136 | |||
WD40 repeat | 1123..1157 | CDD:293791 | |||
WD40 repeat | 1162..1197 | CDD:293791 | |||
WD40 repeat | 1204..1237 | CDD:293791 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |