DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG4901 and AT1G27900

DIOPT Version :9

Sequence 1:	NP_001334733.1	Gene:	CG4901 / 34357	FlyBaseID:	FBgn0032194	Length:	694	Species:	Drosophila melanogaster
Sequence 2:	NP_564296.1	Gene:	AT1G27900 / 839683	AraportID:	AT1G27900	Length:	700	Species:	Arabidopsis thaliana

Alignment Length:	654	Identity:	252/654 - (38%)
Similarity:	389/654 - (59%)	Gaps:	33/654 - (5%)

- Green bases have known domain annotations that are detailed below.

  Fly    67 SLPVFNCRHRILKELEANDTVLIMSETGSGKTTQIPQFLLLAGYAKNGMIGITQPRRVAAITVAR 131
            :||:.....:|::.:|.|..|:|:.||||||:||:.|.|...||.|:|:|.|||||||||::|||
plant     3 NLPILQFEEKIVETVEKNSVVVIIGETGSGKSTQLSQILHRHGYTKSGVIAITQPRRVAAVSVAR 67

  Fly   132 RVAQELNGTIGDTVGYTVRFEDVTSRATKIRFLTDGVLLRESIKDRLLLKYSVIILDEAHERTVN 196
            ||||||:..:|:.|||.:||||.|:..|:|::||||||||||:.:.:|..||||||||||||::|
plant    68 RVAQELDVPLGEDVGYAIRFEDRTTSKTRIKYLTDGVLLRESLSNPMLDDYSVIILDEAHERSLN 132

  Fly   197 ADLLFGIVKDAQKERRKQKLANLKVVVTSATMDIDHFGNYFN-CKGMYLEGRTYPVRVMHTKEEH 260
            .|:|.|:||...:.|    .:|.||::||||:|.:....:|: |..:.:.|:.|||.::::||..
plant   133 TDILLGLVKRLVRIR----ASNFKVLITSATLDGEKVSEFFSGCPVLNVPGKLYPVEILYSKERP 193

  Fly   261 EDYIHTVLVTLFHIHRTTPKNHDVLIFLTGQEEIESLAQQIRQLAKIDTTGT-TDLRVFTLYAQL 324
            ..||.:.|.....||...|:. |:|||:|||::||.|..::.:..:....|: .|..::.|:..|
plant   194 VSYIESSLKVAIDIHVREPEG-DILIFMTGQDDIEKLVSRLEEKVRSLAEGSCMDAIIYPLHGSL 257

  Fly   325 SQGKQLECFVPTPANVRKVILATNIAETSITIPGIRCVIDCGFVKEKSFNTVDGLDVLKSVRISK 389
            ....|:..|.|.|.|.|:.|::|||||||:|:.|:..|||.|:||::.:|...|:..|..::|||
plant   258 PPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDSGYVKQRQYNPSSGMFSLDVIQISK 322

  Fly   390 AQAWQRAGRAGRDADGTCYRAYTKA-EMDSFADATQPEILRTNPTSMVLQLLAL---DIDCNNFD 450
            .||.||||||||...|.|||.|..| ..|.|.|||.|||.||:....||.|.:|   |||...||
plant   323 VQANQRAGRAGRTRPGKCYRLYPLAVYRDDFLDATIPEIQRTSLAGSVLYLKSLDLPDIDILKFD 387

  Fly   451 FLDPPLEDGLRSAYKSLDALGAIKTGDDSYITPLGRQMVQYPLDPKYSKLLLTASSFGCMEEILS 515
            |||.|..:.|..|.|.|..:.||  .::..||.:||.|...||:|..|:.|:.|:..||:.:.|:
plant   388 FLDAPSSESLEDALKQLYFIDAI--DENGAITRIGRTMSDLPLEPSLSRTLIEANETGCLSQALT 450

  Fly   516 LVSVLSSDHVFVSNSEKNEMAALAHAKFQ-----SKHGDHLTLLNVFNGFLKSEKPKMWCHDNYL 575
            :|::||::...:....|.......|.:..     |.:|||:.||.:|..:.::....:||.:|.:
plant   451 VVAMLSAETTLLPARSKPSEKKRKHDEDSNLPNGSGYGDHIQLLQIFESWDRTNYDPVWCKENGM 515

  Fly   576 NLRSLTYARNVRRQLREI-----SEHLHLAL-----NSSDDIEMLKKCILNGFFENIA--VLQRD 628
            .:|.:.:.::|||||.:|     .:.|.:..     :|.||...|:|.:..|....||  :|:.:
plant   516 QVRGMVFVKDVRRQLCQIMQKISKDRLEVGADGRKSSSRDDYRKLRKALCVGNANQIAERMLRHN 580

  Fly   629 GFYITASGNIRSKIHPSSVL---HGKYKPSYILFTEIVQTEQTFLRQVTEISIEWIKEVVPFVKN 690
            |:...:..:...::||||||   :....|:|:::.|::.|.:.|:|.|..:.:.|:..:...::.
plant   581 GYRTLSFQSQLVQVHPSSVLSADNDGMMPNYVVYHELISTTRPFMRNVCAVDMAWVAPIKRKIEK 645

  Fly   691 IPTR 694
            :..|
plant   646 LNVR 649

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG4901	NP_001334733.1	None
AT1G27900	NP_564296.1	HrpA	3..639	CDD:224557	251/642 (39%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG1643
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D354219at2759
OrthoFinder	1	1.000	-	-		FOG0000059
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	6	5.780