DRSC/TRiP Functional Genomics Resources

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Protein Alignment ath and AT5G10370

DIOPT Version :10

Sequence 1:NP_609356.2 Gene:ath / 34357 FlyBaseID:FBgn0032194 Length:694 Species:Drosophila melanogaster
Sequence 2:NP_196599.2 Gene:AT5G10370 / 830901 AraportID:AT5G10370 Length:1775 Species:Arabidopsis thaliana


Alignment Length:663 Identity:222/663 - (33%)
Similarity:351/663 - (52%) Gaps:67/663 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 RTSIEQQQKSLPVFNCRHRILKELEANDTVLIMSETGSGKTTQIPQFLLLAGYAKNGMIGITQPR 122
            |....:.:..||::..|.:|||::.....::::.||||||:||:.|||..:|.|.:..|..||||
plant   296 RRECRRLEDGLPIYAYRRQILKKIHREQIMVLIGETGSGKSTQLVQFLADSGVAASESIVCTQPR 360

  Fly   123 RVAAITVARRVAQELNGTIGD-TVGYTVRFEDVTSRATKIRFLTDGVLLRESIKDRLLLKYSVII 186
            ::||:|:|.||.:|.:|...: ||..|..|......::|:.::||..||:..:|||.|...|.:|
plant   361 KIAAMTLADRVREESSGCYEENTVSCTPTFSSTEEISSKVVYMTDNCLLQHYMKDRSLSGISCVI 425

  Fly   187 LDEAHERTVNADLLFGIVKDAQKERRKQKLANLKVVVTSATMDIDHFGNY-FNCKGMYLEGRTYP 250
            :||||||::|.|||..::|.....|     .:|::|:.|||.|......| |:|..:.:.||.:|
plant   426 IDEAHERSLNTDLLLALLKKLLSRR-----IDLRLVIMSATADAKQLSQYFFSCGILLVNGRNFP 485

  Fly   251 VRVMHTKEEHED---------YIHTVLVTLFHIHRTTPKNHDVLIFLTGQEEIESLAQQIRQLAK 306
            |.::::..:.|:         |:..|:.....||: |.|...:|.|||.|.|:|...::..    
plant   486 VEIVYSPSDTEENSVVGGIASYVGDVVKMAVEIHK-TEKEGTILAFLTSQAEVEWACERFI---- 545

  Fly   307 IDTTGTTDLRVFTLYAQLSQGKQLECFVPTPANVRKVILATNIAETSITIPGIRCVIDCGFVKEK 371
                 |.......|:.:||..:|...|...|.. ||||.||||||||:||||::.|||.|.|||.
plant   546 -----TPSAIALPLHGKLSFEEQFRVFQNHPGR-RKVIFATNIAETSLTIPGVKYVIDSGMVKES 604

  Fly   372 SFNTVDGLDVLKSVRISKAQAWQRAGRAGRDADGTCYRAYTKAEMDSFADATQPEILRTNPTSMV 436
            .:....|:.:||..|:|::.|.||||||||...|.|||.|:|.:.||.....:|||.|.:....:
plant   605 KYEPRTGMSILKVCRVSQSSARQRAGRAGRTEPGRCYRLYSKNDFDSMNLNQEPEIRRVHLGVAL 669

  Fly   437 LQLLALDIDCNN---FDFLDPPLEDGLRSAYKSLDALGAI--KTGDDSYITPLGRQMVQYPLDPK 496
            |::|||.:  ||   |:|:|.|:.:.:..|.::|..|||:  |.|... :|..|..:|:..|:||
plant   670 LRMLALGV--NNIAEFNFVDAPVPEAIAMAVQNLVQLGAVVEKNGVHE-LTQEGHCLVKLGLEPK 731

  Fly   497 YSKLLLTASSFGCM-----EEILSLVSVL-SSDHVF--VSNSEKNEMAALAHAKFQSKHGDHLTL 553
            ..||:|     ||.     :|.:.|.:|: ::..:|  |.|.:....|.....:|.:::||..||
plant   732 LGKLIL-----GCFRHRMGKEGIVLAAVMANASSIFCRVGNFDDKMKADRLKVQFCNQNGDLFTL 791

  Fly   554 LNVFNGF--LKSEKPKMWCHDNYLNLRSLTYARNVRRQLREISEHLHLALNS-----------SD 605
            |:|:..:  |..|:...||.:|.||.:|:....:..::| ||.....|.|.|           :.
plant   792 LSVYKEWASLPRERRNKWCWENSLNAKSMRRCEDTVKEL-EICIERELTLVSPSYWVWNPNEGTK 855

  Fly   606 DIEMLKKCILNGFFENIAV---LQRDGFYITASGNIRSKIHPS-SVLHGKYKPSYILFTEIVQTE 666
            ..:.||..||....||:|:   ..:.|:.:..:|. :.::||| |:|....|||:::|.|::...
plant   856 HDKHLKMVILASLAENVAMYTGYNQLGYEVALTGQ-QVQLHPSCSLLAFGQKPSWVVFGELLSIV 919

  Fly   667 QTFLRQVTEISIE 679
            ..:|..||....|
plant   920 DQYLVCVTACDFE 932

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
athNP_609356.2 HrpA 67..>686 CDD:441249 221/654 (34%)
AT5G10370NP_196599.2 HrpA 304..>756 CDD:441249 173/475 (36%)
OB_NTP_bind 860..937 CDD:400182 23/74 (31%)
RING_Ubox 1561..>1591 CDD:473075
BRcat_RBR 1646..1699 CDD:438996
Rcat_RBR_DEAH12-like 1718..1768 CDD:439036
Blue background indicates that the domain is not in the aligned region.

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