DRSC/TRiP Functional Genomics Resources

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Protein Alignment ath and ABO6

DIOPT Version :10

Sequence 1:NP_609356.2 Gene:ath / 34357 FlyBaseID:FBgn0032194 Length:694 Species:Drosophila melanogaster
Sequence 2:NP_680142.2 Gene:ABO6 / 830371 AraportID:AT5G04895 Length:1161 Species:Arabidopsis thaliana


Alignment Length:787 Identity:222/787 - (28%)
Similarity:381/787 - (48%) Gaps:135/787 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDSKYFATSR-NDAVGPS-PVKFSFK---RKYDAMANSPILEKKPHVAQIKQTIAPILLTSKRTS 60
            :||:..::.: |:.|..| |.|.:.:   ...|:..:..::||      :.|..:..:...:||.
plant   186 LDSQQLSSGKANECVADSQPPKQTEELPDENSDSFLDGSVMEK------VLQRRSMRMRNMQRTW 244

  Fly    61 IEQQQ--------KSLPVFNCRHRILKELEANDTVLIMSETGSGKTTQIPQFLL----LAGYAKN 113
            .|..:        |:||.|..:.|:|:.:..|..:::..|||.|||||:||::|    .:|....
plant   245 QESPEGRTMLEFRKTLPSFKDKERLLQAIARNQVIVVSGETGCGKTTQLPQYILESEIESGRGAF 309

  Fly   114 GMIGITQPRRVAAITVARRVAQELNGTIGDTVGYTVRFEDVTSRATKIRFLTDGVLLRESIKDRL 178
            ..|..|||||::|:.|:.||:.|....:|:|||:.||.|.:..:.|.:.|.|.|:|||..:.||.
plant   310 CNIICTQPRRISAMAVSERVSAERGEPLGETVGFKVRLEGMRGKNTHLLFCTSGILLRRLLSDRN 374

  Fly   179 LLKYSVIILDEAHERTVNADLLFGIVKDAQKERRKQKLANLKVVVTSATMDIDHFGNYF-NCKGM 242
            |...:.:.:||.|||.:|.|.|..::|:....|     .:|::|:.|||::.:.|.||: ....:
plant   375 LNGVTHVFVDEIHERGMNEDFLIIVLKELLPRR-----PDLRLVLMSATLNAELFSNYYGGAPTI 434

  Fly   243 YLEGRTYPVRVMH---------------------------------------------------T 256
            ::.|.|:||:. |                                                   :
plant   435 HIPGFTHPVKA-HFLEDVLEITGYKLTSFNQVDDYGQEKTWKTQKQLMPRKRKNQITTLVEEALS 498

  Fly   257 KEEHEDY-----------------IHTVLVTLFHIHRTTPKNHDVLIFLTGQEEIESLAQQIRQL 304
            |...|.|                 .:.:...|.||.| ..:...||:||||.::|.||:.||:..
plant   499 KSNFESYNSRTRDSLSSWMPDCIGFNLIEAVLCHICR-KERPGAVLVFLTGWDDIRSLSDQIKAH 562

  Fly   305 AKIDTTGTTDLRVFTL--YAQLSQGKQLECFVPTPANVRKVILATNIAETSITIPGIRCVIDCGF 367
            ..:....    ||..|  :..::..:|...|...|.|:||::||||:||.||||..:..|:|||.
plant   563 PLLGDPN----RVLLLMCHGSMATAEQRLIFERAPPNIRKIVLATNMAEASITINDVVFVVDCGK 623

  Fly   368 VKEKSFNTVDGLDVLKSVRISKAQAWQRAGRAGRDADGTCYRAYTKAEMDSFADATQPEILRTNP 432
            .||.:::.::....|....||:|.|.||.|||||...|.||..|.|...|:||:...||:|||..
plant   624 AKETTYDALNNTPCLLPSWISQASARQRRGRAGRLFPGECYHLYPKCVYDAFAEYQLPELLRTPL 688

  Fly   433 TSMVLQLLALDIDCNNFDFLDPPLED----GLRSAYKSLDALGAIKTGDDSYITPLGRQMVQYPL 493
            .|:.||:.:|.:: :..:||...|:.    .:::|...|..:||:...::  :|.||:.:...|:
plant   689 NSLCLQIKSLQVE-SIAEFLSAALQAPESLAVQNAIGFLKMIGALDEKEN--LTDLGKLLSILPV 750

  Fly   494 DPKYSKLLLTASSFGCMEEILSLVSVLSSDHVFVSNSEKNEMAALAHAKFQSK-HGDHLTLLNVF 557
            |||..|:|:..:.|.|.:.||::||.||....|:...:|.::|..|..:|.:| :.||:.|:..|
plant   751 DPKLGKMLIMGAIFRCFDPILTIVSGLSVRDPFLLPQDKKDLALSAKLRFSAKDYSDHMALVRAF 815

  Fly   558 NGFLKSEKPKM---WCHDNYLNLRSLTYARNVRRQLREISE-----HLHLALNS--SDDIEMLKK 612
            .|:..:|:...   :|..|:|:.::|....::|:|...|.:     |..||||:  |.:..:::.
plant   816 EGWKDAEREGSAYEFCWRNFLSAQTLQAIHSLRKQFNYILKEAGLVHDDLALNNKLSHNQSLVRA 880

  Fly   613 CILNGFFENIA-VLQRD---GFYITASGNIRSKIHPSSVLHGKYKPS----YILFTEIVQTEQTF 669
            .|.:|.|..|| |:.|:   .|.....|.:  .::.:|| :.:: |:    :::|.|.|:.....
plant   881 VICSGLFPGIASVVHRETSMSFKTMDDGQV--SLYANSV-NSRF-PTIPYPWLVFGEKVKVNAVL 941

  Fly   670 LRQVTEI 676
            :|..|.:
plant   942 IRDSTGV 948

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
athNP_609356.2 HrpA 67..>686 CDD:441249 207/708 (29%)
ABO6NP_680142.2 HrpA 266..>859 CDD:441249 181/606 (30%)
OB_NTP_bind 878..960 CDD:400182 17/75 (23%)
DSRM_SF 1061..1119 CDD:444671
Blue background indicates that the domain is not in the aligned region.

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