DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ath and MEE29

DIOPT Version :10

Sequence 1:NP_609356.2 Gene:ath / 34357 FlyBaseID:FBgn0032194 Length:694 Species:Drosophila melanogaster
Sequence 2:NP_181077.3 Gene:MEE29 / 818101 AraportID:AT2G35340 Length:1044 Species:Arabidopsis thaliana


Alignment Length:635 Identity:264/635 - (41%)
Similarity:402/635 - (63%) Gaps:21/635 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 IEQQQKSLPVFNCRHRILKELEANDTVLIMSETGSGKTTQIPQFLLLAGYAKNGMIGITQPRRVA 125
            :::.:|:||::..|.::|..::.:..::|:.||||||||||||:|..|||.|.|.:|.|||||||
plant   397 LQEDRKALPIYTYRDQLLNAVKDHQVLIIVGETGSGKTTQIPQYLHEAGYTKLGKVGCTQPRRVA 461

  Fly   126 AITVARRVAQELNGTIGDTVGYTVRFEDVTSRATKIRFLTDGVLLRESIKDRLLLKYSVIILDEA 190
            |::||.|||||:.|.:|..|||::||||.||..|.::::|||:||||.:.:..|..|||||:|||
plant   462 AMSVAARVAQEMGGKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLRELLGEPDLGSYSVIIVDEA 526

  Fly   191 HERTVNADLLFGIVKDAQKERRKQKLANLKVVVTSATMDIDHFGNYFNCKGMY-LEGRTYPVRVM 254
            ||||:..|:|||:|||..:.|     .:||::::|||||.:.|.::|:...:: ..||.|||.:.
plant   527 HERTLRTDILFGLVKDIARAR-----PDLKLLISSATMDAEKFSDFFDQAPIFRFPGRRYPVDIC 586

  Fly   255 HTKEEHEDYIHTVLVTLFHIHRTTPKNHDVLIFLTGQEEIESLAQQIRQLAKIDTTGT--TDLRV 317
            .|.....||:...:.|:..||...|.. |||:||.||||||::.:.::.  ||...||  .:|.:
plant   587 FTTAPEADYMDAAITTVLTIHVKEPLG-DVLVFLPGQEEIEAVEENLKH--KIRGLGTKIRELII 648

  Fly   318 FTLYAQLSQGKQLECFVPTPANVRKVILATNIAETSITIPGIRCVIDCGFVKEKSFNTVDGLDVL 382
            ..:||.|....|.:.|.|||...|||:|||||||||:||.||:.|:|.||.|.||:|...|::.|
plant   649 CPIYANLPSELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESL 713

  Fly   383 KSVRISKAQAWQRAGRAGRDADGTCYRAYTKAE-MDSFADATQPEILRTNPTSMVLQLLALDI-D 445
            ....||||.|.||.|||||.:.|.|||.||... .:...|.|.|||.|||..|:||.|.:|.| :
plant   714 LVTPISKASATQRTGRAGRTSPGKCYRLYTAFNYYNDLEDNTVPEIQRTNLASVVLSLKSLGIHN 778

  Fly   446 CNNFDFLDPPLEDGLRSAYKSLDALGAI-KTGDDSYITPLGRQMVQYPLDPKYSKLLLTASSFGC 509
            ..||||:|||..:.|..:.:.|.||||: :.|:   :|..||:|.::||||..||:::.:..:.|
plant   779 LLNFDFMDPPPSEALIKSLELLFALGALNQLGE---LTKAGRRMAEFPLDPMLSKMIVVSDKYKC 840

  Fly   510 MEEILSLVSVLS-SDHVFVSNSEKNEMAALAHAKFQ-SKHGDHLTLLNVFNGFLKSEKPKMWCHD 572
            .:||:|:.::|| ...:|....:|...|..|...|. ...|||:..|.::|.:.::.....||::
plant   841 SDEIISIAAMLSIGPSIFYRPKDKQVHADNAMKNFHVGNVGDHIAFLKIYNSWKETNYSTQWCYE 905

  Fly   573 NYLNLRSLTYARNVRRQLREISEHLHLALNS-SDDIEMLKKCILNGFFENIAVLQRDGFYITASG 636
            ||:.:||:..||::|.||..:.|.:.:.::| :::::.::|.|:.|||.:.|.||::|.|.|...
plant   906 NYIQVRSMKRARDIRDQLEGLLERVEIDVSSNANELDSIRKSIVAGFFPHTAKLQKNGSYRTVKH 970

  Fly   637 NIRSKIHPSSVLHGKYKPSYILFTEIVQTEQTFLRQVTEISIEWIKEVVP 686
            .....|||:|.| .:..|.::::.::|.|.:.::|||||:..||:.|:.|
plant   971 PQTVHIHPASGL-SQVLPRWVVYHQLVLTSKEYMRQVTELKPEWLIEIAP 1019

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
athNP_609356.2 HrpA 67..>686 CDD:441249 262/627 (42%)
MEE29NP_181077.3 DUF5401 <77..>282 CDD:375164
HrpA 403..>1031 CDD:441249 263/629 (42%)
Blue background indicates that the domain is not in the aligned region.

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