DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4901 and dhx35

DIOPT Version :9

Sequence 1:NP_001334733.1 Gene:CG4901 / 34357 FlyBaseID:FBgn0032194 Length:694 Species:Drosophila melanogaster
Sequence 2:NP_001072515.1 Gene:dhx35 / 779970 XenbaseID:XB-GENE-5868299 Length:701 Species:Xenopus tropicalis


Alignment Length:647 Identity:272/647 - (42%)
Similarity:402/647 - (62%) Gaps:30/647 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 SIEQQQKSLPVFNCRHRILKELEANDTVLIMSETGSGKTTQIPQFLLLAGYAKNG-MIGITQPRR 123
            |||.|::.||||..|:.||..:|...||:|:.|||.||:|||||:|..||:...| ::|:|||||
 Frog    44 SIEHQRQKLPVFKLRNHILYLVENYQTVVIIGETGCGKSTQIPQYLTEAGWTAEGRVVGVTQPRR 108

  Fly   124 VAAITVARRVAQELNGTIGDTVGYTVRFEDVTS-RATKIRFLTDGVLLRESIKDRLLLKYSVIIL 187
            |||::||.|||:|....:|..|||.:||:|.|. :||:|:|||||:|:||.:.|.||.:|||::|
 Frog   109 VAAVSVAGRVAEERGAVLGHEVGYCIRFDDCTDPQATRIKFLTDGMLVREMMSDPLLTRYSVLML 173

  Fly   188 DEAHERTVNADLLFGIVKDAQKERRKQKLANLKVVVTSATMDIDHFGNYFN-----------CKG 241
            |||||||:..|:..|::|..||:|     .:|::||.|||:|.:.|..:||           |..
 Frog   174 DEAHERTLYTDIAIGLLKKVQKKR-----GDLRLVVASATLDAEKFKAFFNQNDTNDPSRDTCAI 233

  Fly   242 MYLEGRTYPVRVMHTKEEHEDYIHTVLVTLFHIHRTTPKNHDVLIFLTGQEEIESLAQQIRQLAK 306
            :.:||||:||.:.:|:....||:.:.:.|:..||::..:. |:|.|||||||:||:...:.:.|:
 Frog   234 LTVEGRTFPVDIFYTQSPVPDYLKSTVQTVMKIHQSDLEG-DILAFLTGQEEVESVVSMLVEQAR 297

  Fly   307 I-DTTG-TTDLRVFTLYAQLSQGKQLECFVPTPANVRKVILATNIAETSITIPGIRCVIDCGFVK 369
            | ..:| ...|||..:||.|...:|::.|.....:.|||::||||||.||||.||..||||||||
 Frog   298 ILSRSGMKKHLRVLPMYAGLPTSEQMKVFERVSHSARKVVVATNIAEASITINGISFVIDCGFVK 362

  Fly   370 EKSFNTVDGLDVLKSVRISKAQAWQRAGRAGRDADGTCYRAYTKAEMDSFADATQPEILRTNPTS 434
            .::::....::.|..|.:|:|.|.|||||:||:..|.|||.||:.:......:|.||:.|:|...
 Frog   363 LRAYDPKRAVESLVVVPVSQASANQRAGRSGRNRSGQCYRLYTEEDFLKLPPSTVPEMQRSNLAP 427

  Fly   435 MVLQLLALDID-CNNFDFLDPPLEDGLRSAYKSLDALGAIKTGDDSY---ITPLGRQMVQYPLDP 495
            ::|||.||.|| ...|.||.||....:..|.:.|.|||    |.|.:   ..|||.:|.::||:|
 Frog   428 VILQLKALGIDNVLRFHFLSPPPAQSMVQALELLYALG----GLDKHCRLTEPLGVRMAEFPLNP 488

  Fly   496 KYSKLLLTASSFGCMEEILSLVSVLSSDHVFVSNSEKNEMAALAHAKFQSKHGDHLTLLNVFNGF 560
            .::|:||.:.:|||..||||:.:::...::||....:...|...|.||..:.|||||:||||..|
 Frog   489 MFAKMLLESGNFGCSAEILSIAAMMQIQNIFVVPPNQKSQAIREHRKFAVEEGDHLTMLNVFEAF 553

  Fly   561 LKSEKPKMWCHDNYLNLRSLTYARNVRRQLREISEHLHLALNSSD-DIEMLKKCILNGFFENIAV 624
            :|..|...||...:||.:.|..|..||.||:::.....:..|||: |.:.:.:||::|||.|.|.
 Frog   554 IKFNKSSHWCQQRFLNYKGLMRAVTVREQLKKLLSKFKVPKNSSEGDPDPILRCIVSGFFANAAK 618

  Fly   625 LQRDGFYITASGNIRSKIHPSSVLHGKYKPSYILFTEIVQTEQTFLRQVTEISIEWIKEVVP 686
            |...|.|.|........|||:|||:.:..|:::||:|:|||.:.::|.||.:...|:.|:.|
 Frog   619 LHSTGVYRTVRDGHELYIHPTSVLYAEKPPNWVLFSEVVQTNKYYMRDVTAVESAWLLELAP 680

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4901NP_001334733.1 None
dhx35NP_001072515.1 HrpA 7..701 CDD:224557 272/647 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D354219at2759
OrthoFinder 1 1.000 - - FOG0000059
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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