Protein Alignment ath and dhx40

DIOPT Version :10

• Sequence 1: NP_609356.2
• Gene: ath / 34357
• FlyBaseID: FBgn0032194
• Length: 694
• Species: Drosophila melanogaster
• Sequence 2: NP_001184155.2
• Gene: dhx40 / 733877
• XenbaseID: XB-GENE-995801
• Length: 744
• Species: Xenopus tropicalis
• Alignment Length: 660
• Identity: 264/660 - (40%)
• Similarity: 391/660 - (59%)
• Gaps: 45/660 - (6%)

  Fly    68 LPVFNCRHRILKELEANDTVLIMSETGSGKTTQIPQFLLLAGYAKNGMIGITQPRRVAAITVARR 132
            ||:...:..::|....|..:::|.:||||||||:||:|..||:.||||||:|||||||.|:||:|
 Frog    21 LPIHRWKGELVKAATDNPFLIVMGDTGSGKTTQLPQYLYKAGFGKNGMIGVTQPRRVATISVAQR 85

  Fly   133 VAQELNGTIGDTVGYTVRFEDVTSRATKIRFLTDGVLLRESIKDRLLLKYSVIILDEAHERTVNA 197
            ||:|:|.::|.||||.|||:|.||..|.|:::|||.|||.::.|..|.|||.|:|||||||:::.
 Frog    86 VAEEMNCSLGSTVGYQVRFDDCTSERTVIKYMTDGCLLRNTLADPDLTKYSTIVLDEAHERSLST 150

  Fly   198 DLLFGIV-KDAQKERRKQKLANLKVVVTSATMDIDHFGNYF-NCKGMYLEGRTYPVR------VM 254
            |:|||:: |..|....|::...|||:|.|||::.....::| ||..:.:.|:.:|::      :.
 Frog   151 DILFGLLKKQFQLRSFKRRKYPLKVIVMSATLESQKLSSFFGNCPVVTIPGKVFPIKERFLNLIG 215

  Fly   255 HTKEEHEDYI-HTVLVTLFHIHRTTPKNHDVLIFLTGQEEIESLAQQIRQLAK-ID------TTG 311
            ...::...|: .||.:|| ..|...|:. |:|:|||||.|||.....:.:.|: ||      ...
 Frog   216 PRDKDSTAYVTETVKITL-QTHLNEPEG-DILVFLTGQAEIERACNLLFKKAEGIDYRHDVYDRS 278

  Fly   312 TTDLRVFTLYAQLSQGKQLECFVPTPANVRKVILATNIAETSITIPGIRCVIDCGFVKEKSFNTV 376
            ...|.:..||..:...:|...|||.|:.:||.:|:||||.||:||.|||.|||.||||:.::|..
 Frog   279 VEGLLILPLYGSMPTDQQKRIFVPPPSGIRKCVLSTNIAATSVTIEGIRYVIDSGFVKQLNYNPR 343

  Fly   377 DGLDVLKSVRISKAQAWQRAGRAGRDADGTCYRAYTKAEMDS-FADATQPEILRTNPTSMVLQLL 440
            .|||:|:.|.|||::|.||||||||.|.|.|:|.|::...|. ..|...|:|.||:..|::|.|.
 Frog   344 AGLDILEIVPISKSEAVQRAGRAGRTAPGKCFRIYSEEFWDKCMPDHMIPDIKRTSLASVILTLK 408

  Fly   441 ALDI-DCNNFDFLDPPLEDGLRSAYKSLDALGAI-KTGDDSYITPLGRQMVQYPLDPKYSKLLLT 503
            .||| |...|.:||.|.|..:..|.|.|....|| :||   .:|.||..::::||.|..:..::.
 Frog   409 CLDIHDVIRFPYLDQPEERHILEALKKLYQCSAIDRTG---CVTKLGHFIIEFPLSPNLACAVIK 470

  Fly   504 ASSFGCMEEILSLVSVLSSDHVFVSN--SEKNEMAALAHAKFQSKHG---DHLTLLNVFNGFLKS 563
            |:||||.:.:|.:.::||.:|||:.:  |:|.:.|.|.|.:.....|   |..|||.:|.....|
 Frog   471 ATSFGCEDLLLPVAAMLSVEHVFIQSGQSQKQKEAGLGHEELSQLAGGCNDFATLLYIFEQCKAS 535

  Fly   564 EKPKMWCHDNYLNLRSLTYARNVRRQLREISEHLHLALNSSDDI----------EMLKKCILNGF 618
            .||..|||:|.::.|:|..|.||.:||:||:..    |..:.|.          |||::|:..|:
 Frog   536 PKPASWCHENGIHWRALKSALNVEKQLKEITNR----LKQNKDFPVEKFDGPRNEMLRRCLCAGY 596

  Fly   619 FENIAVLQRDGFYITASGN-IRSKIHPSSVLHGKYKP-SYILFTEIVQTEQTFLRQVTEISIEWI 681
            |.|:|.......:.|..|: ....|||||.|.||... .:|||..::.|.:.|:|.|..|..||:
 Frog   597 FSNVARRSVGRTFCTMDGHGSMIHIHPSSALFGKESELEWILFHNVLVTSKIFVRTVCPIRYEWV 661

  Fly   682 KEVVPFVKNI 691
            |:::|.:.:|
 Frog   662 KDLLPKLHDI 671

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ath	NP_609356.2	HrpA	67..>686	CDD:441249	262/653 (40%)
dhx40	NP_001184155.2	HrpA	17..>668	CDD:441249	263/655 (40%)