DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4901 and dhx40

DIOPT Version :9

Sequence 1:NP_001334733.1 Gene:CG4901 / 34357 FlyBaseID:FBgn0032194 Length:694 Species:Drosophila melanogaster
Sequence 2:NP_001184155.2 Gene:dhx40 / 733877 XenbaseID:XB-GENE-995801 Length:744 Species:Xenopus tropicalis


Alignment Length:660 Identity:264/660 - (40%)
Similarity:391/660 - (59%) Gaps:45/660 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 LPVFNCRHRILKELEANDTVLIMSETGSGKTTQIPQFLLLAGYAKNGMIGITQPRRVAAITVARR 132
            ||:...:..::|....|..:::|.:||||||||:||:|..||:.||||||:|||||||.|:||:|
 Frog    21 LPIHRWKGELVKAATDNPFLIVMGDTGSGKTTQLPQYLYKAGFGKNGMIGVTQPRRVATISVAQR 85

  Fly   133 VAQELNGTIGDTVGYTVRFEDVTSRATKIRFLTDGVLLRESIKDRLLLKYSVIILDEAHERTVNA 197
            ||:|:|.::|.||||.|||:|.||..|.|:::|||.|||.::.|..|.|||.|:|||||||:::.
 Frog    86 VAEEMNCSLGSTVGYQVRFDDCTSERTVIKYMTDGCLLRNTLADPDLTKYSTIVLDEAHERSLST 150

  Fly   198 DLLFGIV-KDAQKERRKQKLANLKVVVTSATMDIDHFGNYF-NCKGMYLEGRTYPVR------VM 254
            |:|||:: |..|....|::...|||:|.|||::.....::| ||..:.:.|:.:|::      :.
 Frog   151 DILFGLLKKQFQLRSFKRRKYPLKVIVMSATLESQKLSSFFGNCPVVTIPGKVFPIKERFLNLIG 215

  Fly   255 HTKEEHEDYI-HTVLVTLFHIHRTTPKNHDVLIFLTGQEEIESLAQQIRQLAK-ID------TTG 311
            ...::...|: .||.:|| ..|...|:. |:|:|||||.|||.....:.:.|: ||      ...
 Frog   216 PRDKDSTAYVTETVKITL-QTHLNEPEG-DILVFLTGQAEIERACNLLFKKAEGIDYRHDVYDRS 278

  Fly   312 TTDLRVFTLYAQLSQGKQLECFVPTPANVRKVILATNIAETSITIPGIRCVIDCGFVKEKSFNTV 376
            ...|.:..||..:...:|...|||.|:.:||.:|:||||.||:||.|||.|||.||||:.::|..
 Frog   279 VEGLLILPLYGSMPTDQQKRIFVPPPSGIRKCVLSTNIAATSVTIEGIRYVIDSGFVKQLNYNPR 343

  Fly   377 DGLDVLKSVRISKAQAWQRAGRAGRDADGTCYRAYTKAEMDS-FADATQPEILRTNPTSMVLQLL 440
            .|||:|:.|.|||::|.||||||||.|.|.|:|.|::...|. ..|...|:|.||:..|::|.|.
 Frog   344 AGLDILEIVPISKSEAVQRAGRAGRTAPGKCFRIYSEEFWDKCMPDHMIPDIKRTSLASVILTLK 408

  Fly   441 ALDI-DCNNFDFLDPPLEDGLRSAYKSLDALGAI-KTGDDSYITPLGRQMVQYPLDPKYSKLLLT 503
            .||| |...|.:||.|.|..:..|.|.|....|| :||   .:|.||..::::||.|..:..::.
 Frog   409 CLDIHDVIRFPYLDQPEERHILEALKKLYQCSAIDRTG---CVTKLGHFIIEFPLSPNLACAVIK 470

  Fly   504 ASSFGCMEEILSLVSVLSSDHVFVSN--SEKNEMAALAHAKFQSKHG---DHLTLLNVFNGFLKS 563
            |:||||.:.:|.:.::||.:|||:.:  |:|.:.|.|.|.:.....|   |..|||.:|.....|
 Frog   471 ATSFGCEDLLLPVAAMLSVEHVFIQSGQSQKQKEAGLGHEELSQLAGGCNDFATLLYIFEQCKAS 535

  Fly   564 EKPKMWCHDNYLNLRSLTYARNVRRQLREISEHLHLALNSSDDI----------EMLKKCILNGF 618
            .||..|||:|.::.|:|..|.||.:||:||:..    |..:.|.          |||::|:..|:
 Frog   536 PKPASWCHENGIHWRALKSALNVEKQLKEITNR----LKQNKDFPVEKFDGPRNEMLRRCLCAGY 596

  Fly   619 FENIAVLQRDGFYITASGN-IRSKIHPSSVLHGKYKP-SYILFTEIVQTEQTFLRQVTEISIEWI 681
            |.|:|.......:.|..|: ....|||||.|.||... .:|||..::.|.:.|:|.|..|..||:
 Frog   597 FSNVARRSVGRTFCTMDGHGSMIHIHPSSALFGKESELEWILFHNVLVTSKIFVRTVCPIRYEWV 661

  Fly   682 KEVVPFVKNI 691
            |:::|.:.:|
 Frog   662 KDLLPKLHDI 671

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4901NP_001334733.1 None
dhx40NP_001184155.2 HrpA 1..700 CDD:224557 264/660 (40%)
DEXDc 40..182 CDD:238005 80/141 (57%)
HELICc 281..368 CDD:197757 45/86 (52%)
HA2 441..526 CDD:214852 29/87 (33%)
OB_NTP_bind 560..668 CDD:285018 36/111 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D354219at2759
OrthoFinder 1 1.000 - - FOG0000059
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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