DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4901 and dhx8

DIOPT Version :9

Sequence 1:NP_001334733.1 Gene:CG4901 / 34357 FlyBaseID:FBgn0032194 Length:694 Species:Drosophila melanogaster
Sequence 2:XP_002932570.2 Gene:dhx8 / 733563 XenbaseID:XB-GENE-6087171 Length:1181 Species:Xenopus tropicalis


Alignment Length:646 Identity:272/646 - (42%)
Similarity:402/646 - (62%) Gaps:17/646 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 KRT--SIEQQQKSLPVFNCRHRILKELEANDTVLIMSETGSGKTTQIPQFLLLAGYAKNGMIGIT 119
            |:|  ||.:|::|||::..:.::::.:..|..::::.||||||||||.|:|..|||...|.||.|
 Frog   513 KKTQMSIVEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTTRGKIGCT 577

  Fly   120 QPRRVAAITVARRVAQELNGTIGDTVGYTVRFEDVTSRATKIRFLTDGVLLRESIKDRLLLKYSV 184
            |||||||::||:||::|....:|..||||:||||.||..|.|:::|||:||||.:.|..|.:|::
 Frog   578 QPRRVAAMSVAKRVSEEYGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAI 642

  Fly   185 IILDEAHERTVNADLLFGIVKDAQKERRKQKLANLKVVVTSATMDIDHFGNYFNCKGMY-LEGRT 248
            |:||||||||::.|:|||::|     :..||..::|::|||||:|...|..||....:: :.|||
 Frog   643 IMLDEAHERTIHTDVLFGLLK-----KTVQKRPDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRT 702

  Fly   249 YPVRVMHTKEEHEDYIHTVLVTLFHIHRTTPKNHDVLIFLTGQEEIESLAQQIRQLAKIDTTGTT 313
            |||.:::|||...||:...|:|:..||.|.|.. |:|:||||||||::..:.:.:..|.......
 Frog   703 YPVEILYTKEPETDYLDASLITVMQIHLTEPPG-DILVFLTGQEEIDTACEILYERMKSLGPDVP 766

  Fly   314 DLRVFTLYAQLSQGKQLECFVPTPANVRKVILATNIAETSITIPGIRCVIDCGFVKEKSFNTVDG 378
            :|.:..:|:.|....|...|.|.|...|||::||||||||:||.||..|:|.||||:|.:|:..|
 Frog   767 ELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTG 831

  Fly   379 LDVLKSVRISKAQAWQRAGRAGRDADGTCYRAYT-KAEMDSFADATQPEILRTNPTSMVLQLLAL 442
            :|.|....||:|||.||||||||...|.|||.|| :|..|.......|||.|||..|.||.|.|:
 Frog   832 IDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAM 896

  Fly   443 DI-DCNNFDFLDPPLEDGLRSAYKSLDALGAIKTGDDSYITPLGRQMVQYPLDPKYSKLLLTASS 506
            .| |..:|||:|.|..:.|.:|.:.|..|||:  .|:..:|.|||:|.::||:|...|:|:.:..
 Frog   897 GINDLLSFDFMDAPPMETLITAMEQLYTLGAL--DDEGLLTRLGRRMAEFPLEPMLCKMLIMSVH 959

  Fly   507 FGCMEEILSLVSVLSSDHVFVSNSEKNEMAALAHAKFQSKHGDHLTLLNVFNGFLKSEKPKMWCH 571
            .||.||:|::||:||..:||....:|..:|....|||....|||||||.|:|.:..::....||:
 Frog   960 LGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCY 1024

  Fly   572 DNYLNLRSLTYARNVRRQLREISEHLHLALNSSDDIEM-LKKCILNGFFENIAVLQRDGFYITAS 635
            :|::..|||..|:::|:|:..|.:...|.:.|.....: ::|.|.:|||.|.|.......|.|..
 Frog  1025 ENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKATVRVQKAICSGFFRNAAKKDPQEGYRTLI 1089

  Fly   636 GNIRSKIHPSSVLHGKYKPSYILFTEIVQTEQTFLRQVTEISIEWIKEVVP--FVKNIPTR 694
            ......|||||.|..: :|.::::.|:|.|.:.::|:||.|...|:.|..|  |..:.||:
 Frog  1090 DQQVVYIHPSSALFNR-QPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTK 1149

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4901NP_001334733.1 None
dhx8XP_002932570.2 Pnp 6..463 CDD:224106
S1_DHX8_helicase 226..304 CDD:240189
HrpA 518..1180 CDD:224557 270/641 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D354219at2759
OrthoFinder 1 1.000 - - FOG0000059
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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