DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4901 and Dhx34

DIOPT Version :9

Sequence 1:NP_001334733.1 Gene:CG4901 / 34357 FlyBaseID:FBgn0032194 Length:694 Species:Drosophila melanogaster
Sequence 2:NP_001272860.1 Gene:Dhx34 / 71723 MGIID:1918973 Length:1145 Species:Mus musculus


Alignment Length:569 Identity:201/569 - (35%)
Similarity:313/569 - (55%) Gaps:37/569 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 QIKQTIAPILLTSKRTSIEQQQKSLPVFNCRHRILKELEANDTVLIMSETGSGKTTQIPQFLLLA 108
            |.||....::      .:::::.:||:....:|||:.|:.:..|::..:||.||:||:||:||.|
Mouse   146 QQKQAFGRLV------KLQRERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAA 204

  Fly   109 GYAKNGMIGITQPRRVAAITVARRVAQELNGTIGDTVGYTVRFEDVTSRATKIRFLTDGVLLRES 173
            |::.   :..|||||:|.|::|:||..|.....|..|||.:|||...|.||||.|||.|:|||:.
Mouse   205 GFSH---VACTQPRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQI 266

  Fly   174 IKDRLLLKYSVIILDEAHERTVNADLLFGIVKDAQKERRKQKLANLKVVVTSATMDIDHFGNYF- 237
            .::..|.:|.|:|:||.|||.::.|.|.|:::....:|     .:|||::.|||::|..|.:|| 
Mouse   267 QREPSLPQYQVLIVDEVHERHLHNDFLLGVLQRLLPQR-----PDLKVILMSATINISLFSSYFS 326

  Fly   238 NCKGMYLEGRTYPVRVMHTKEEHEDYI--------HTVLVTLFHIHRTTP--KNHDVLIFLTGQE 292
            :...:.:.||.:|:.|::..:|.:...        ...|..|..|....|  :..|:|:||:|..
Mouse   327 HAPVVQVPGRLFPITVVYQPQEADQTASKSEKLDPRPFLRVLEAIDNKYPPEERGDLLVFLSGMA 391

  Fly   293 EIESLAQQIRQLAKIDTTGTTDLRVFTLYAQLSQGKQLECFVPTPANVRKVILATNIAETSITIP 357
            ||.::....:..|.:    |....|..|::.||...|.:.|...||.|||.||:|||||||:||.
Mouse   392 EITTVLDAAQAYASL----TQRWVVLPLHSALSVSDQDKVFDVAPAGVRKCILSTNIAETSVTID 452

  Fly   358 GIRCVIDCGFVKEKSFNTVDGLDVLKSVRISKAQAWQRAGRAGRDADGTCYRAYTKAEMDSFADA 422
            |||.|:|.|.|||.|::....|..|:...||:|.|.||.|||||...|.|||.|.:::.|:||..
Mouse   453 GIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRTGPGVCYRLYAESDYDAFAPY 517

  Fly   423 TQPEILRTNPTSMVLQLLALDI-DCNNFDFLDPPLEDGLRSAYKSLDALGAIKTGDDSYITPLGR 486
            ..|||.|....::|||:.::.: |...|.|::||....:.:|...|...||:.:.:  .:||:|.
Mouse   518 PVPEIRRVALDALVLQMKSMSVGDPRTFPFIEPPPPASVETAILYLQEQGALDSSE--ALTPIGS 580

  Fly   487 QMVQYPLDPKYSKLLLTASSFGCMEEILSLVSVLSSDHVFVSNSEKNEMAALAHAKFQSKHGDHL 551
            .:.|.|:|....|:|:..|.|...|.:|::.:.||....|..:::.|...|.|....:|..||..
Mouse   581 LLAQLPVDVVIGKMLILGSMFSLAEPVLTIAAALSVQSPFTRSAQSNLDCATARRPLESDQGDPF 645

  Fly   552 TLLNVFNGF--LKSEK---PKMWCHDNYLNLRSLTYARNVRRQLREISE 595
            ||.||||.:  :|||:   .:.||....:....|....|:|||.:|:.|
Mouse   646 TLFNVFNAWVQVKSERSGNSRKWCRRRGVEEHRLYEMANLRRQFKELLE 694

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4901NP_001334733.1 None
Dhx34NP_001272860.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..27
HrpA 153..>688 CDD:224557 194/554 (35%)
DEAH box 281..284 2/2 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 726..764
OB_NTP_bind 800..910 CDD:369483
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1091..1114
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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