DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ath and Dhx34

DIOPT Version :10

Sequence 1:NP_609356.2 Gene:ath / 34357 FlyBaseID:FBgn0032194 Length:694 Species:Drosophila melanogaster
Sequence 2:NP_001258381.1 Gene:Dhx34 / 684903 RGDID:1584452 Length:1143 Species:Rattus norvegicus


Alignment Length:552 Identity:199/552 - (36%)
Similarity:307/552 - (55%) Gaps:31/552 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 IEQQQKSLPVFNCRHRILKELEANDTVLIMSETGSGKTTQIPQFLLLAGYAKNGMIGITQPRRVA 125
            :::::.:||:....:|||:.|:.:..|::..:||.||:||:||:||.||::.   :..|||||:|
  Rat   156 LQRERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSH---VACTQPRRIA 217

  Fly   126 AITVARRVAQELNGTIGDTVGYTVRFEDVTSRATKIRFLTDGVLLRESIKDRLLLKYSVIILDEA 190
            .|::|:||..|.....|..|||.:|||...|.||||.|||.|:|||:...:..|.:|.|:|:||.
  Rat   218 CISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQIQCEPRLPQYQVLIVDEV 282

  Fly   191 HERTVNADLLFGIVKDAQKERRKQKLANLKVVVTSATMDIDHFGNYF-NCKGMYLEGRTYPVRVM 254
            |||.::.|.|.|:::....:|     .:|||::.|||::|..|.:|| :...:.:.||.:|:.|:
  Rat   283 HERHLHNDFLLGVLQRLLPQR-----PDLKVILMSATINISLFSSYFSHAPVVQVPGRLFPITVV 342

  Fly   255 HTKEEHEDYI--------HTVLVTLFHIHRTTP--KNHDVLIFLTGQEEIESLAQQIRQLAKIDT 309
            :..:|.|...        ...|..|..|....|  :..|:|:||:|..||.:    :...|:...
  Rat   343 YQPQEAEQSASKSEKLDPRPFLRVLEAIDNKYPPEERGDLLVFLSGMAEIST----VLDAAQAYA 403

  Fly   310 TGTTDLRVFTLYAQLSQGKQLECFVPTPANVRKVILATNIAETSITIPGIRCVIDCGFVKEKSFN 374
            |.|....|..|::.||...|.:.|...||.|||.||:|||||||:||.|||.|:|.|.|||.|::
  Rat   404 TLTQRWVVLPLHSALSVADQDKVFDVAPAGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYD 468

  Fly   375 TVDGLDVLKSVRISKAQAWQRAGRAGRDADGTCYRAYTKAEMDSFADATQPEILRTNPTSMVLQL 439
            ....|..|:...||:|.|.||.|||||...|.|||.|.:::.|:||....|||.|....::|||:
  Rat   469 PQAKLQRLQEFWISQASAEQRKGRAGRTGPGVCYRLYAESDYDAFAPYPVPEIRRVALDALVLQM 533

  Fly   440 LALDI-DCNNFDFLDPPLEDGLRSAYKSLDALGAIKTGDDSYITPLGRQMVQYPLDPKYSKLLLT 503
            .::.: |...|.|::||....:.:|...|...||:.:.:  .:||:|..:.|.|:|....|:::.
  Rat   534 KSMSVGDPRTFPFIEPPPAASVETAILYLQDQGALDSSE--ALTPIGSLLAQLPVDVVIGKMMIL 596

  Fly   504 ASSFGCMEEILSLVSVLSSDHVFVSNSEKNEMAALAHAKFQSKHGDHLTLLNVFNGF--LKSEK- 565
            .|.|...|.:|::.:.||....|..:::.|...|.|....:|..||..||.||||.:  :|||: 
  Rat   597 GSMFSLAEPVLTIAAALSVQSPFTRSAQSNLDCATARRPLESDQGDPFTLFNVFNAWVQVKSERS 661

  Fly   566 --PKMWCHDNYLNLRSLTYARNVRRQLREISE 595
              .:.||....:....|....|:|||.:|:.|
  Rat   662 GNSRKWCRRRGVEEHRLYEMANLRRQFKELLE 693

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
athNP_609356.2 HrpA 67..>686 CDD:441249 199/546 (36%)
Dhx34NP_001258381.1 HrpA 161..>627 CDD:441249 175/479 (37%)
OB_NTP_bind 798..909 CDD:400182
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.