DRSC/TRiP Functional Genomics Resources

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Protein Alignment ath and Dhx40

DIOPT Version :10

Sequence 1:NP_609356.2 Gene:ath / 34357 FlyBaseID:FBgn0032194 Length:694 Species:Drosophila melanogaster
Sequence 2:NP_080467.3 Gene:Dhx40 / 67487 MGIID:1914737 Length:779 Species:Mus musculus


Alignment Length:686 Identity:255/686 - (37%)
Similarity:389/686 - (56%) Gaps:59/686 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 PILLTSKRTS----IEQQQK-----------SLPVFNCRHRILKELEANDTVLIMSETGSGKTTQ 100
            ||.|..:|.|    .::::|           :.|:...|.::::.:..|..:::...||||||||
Mouse    21 PIELQEERPSAVRIADREEKGCTSQEGGTTPTFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQ 85

  Fly   101 IPQFLLLAGYAKNGMIGITQPRRVAAITVARRVAQELNGTIGDTVGYTVRFEDVTSRATKIRFLT 165
            :|::|..||::::||||:||||:||||:||:|||:|:..|:|..|||.|||:|.:|:.|.|:::|
Mouse    86 LPKYLYEAGFSQHGMIGVTQPRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMT 150

  Fly   166 DGVLLRESIKDRLLLKYSVIILDEAHERTVNADLLFGIVKDAQKERRKQKLANLKVVVTSATMDI 230
            ||.||:..:.|..|.|:||||||||||||:..|:|||::|...:::...:..:|||||.||||::
Mouse   151 DGCLLKHILGDPNLSKFSVIILDEAHERTLTTDILFGLLKKLFQDKSPNRKEHLKVVVMSATMEL 215

  Fly   231 DHFGNYF-NCKGMYLEGRTYPVR------VMHTKEEHEDYIHTVLVTLFHIHRTTPKNHDVLIFL 288
            .....:| ||....:.||.||||      :.....|:..||..::.....||...... |:|:||
Mouse   216 AKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAG-DILVFL 279

  Fly   289 TGQEEIESLAQQIRQLAK-----IDTTGTT--DLRVFTLYAQLSQGKQLECFVPTPANVRKVILA 346
            |||.|||...:.:.|:|:     .|...||  .|.:...|..::..:|...|:|.|..:||.:::
Mouse   280 TGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVIS 344

  Fly   347 TNIAETSITIPGIRCVIDCGFVKEKSFNTVDGLDVLKSVRISKAQAWQRAGRAGRDADGTCYRAY 411
            |||:.||:||.|||.|:|.||||:.:.|...|||:|:.|.|||::|.||:|||||.|.|.|:|.|
Mouse   345 TNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTASGKCFRIY 409

  Fly   412 TKAEMDS-FADATQPEILRTNPTSMVLQLLALDI-DCNNFDFLDPPLEDGLRSAYKSLDALGAI- 473
            :|..... ..|...|||.||:.||:||.|..|.| |...|.:||||.|..:..|.|.|....|| 
Mouse   410 SKEFWSQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQCDAID 474

  Fly   474 KTGDDSYITPLGRQMVQYPLDPKYSKLLLTASSFGCMEEILSLVSVLSSDHVFVS--NSEKNEMA 536
            ::|   ::|.||..||::||.|..:..::.|:|..|.:.:|.:.::||.::||:.  :.|..:.|
Mouse   475 RSG---HVTRLGLSMVEFPLPPHLTCAVIRAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEA 536

  Fly   537 ALAHAKFQSKHG---DHLTLLNVFNGFLKSEKPKMWCHDNYLNLRSLTYARNVRRQLREISEHLH 598
            ...|.:..:|.|   |..||..:|.....|..|..||..::::.|.|..|..|..||||:...|.
Mouse   537 EQRHRELAAKAGGFNDFATLAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLK 601

  Fly   599 LALNSSD---------DIEMLKKCILNGFFENIAVLQRDGFYITASGNIRSK---IHPSSVLH-G 650
               ..||         ..|:|::|:..|:|:|:|.......:.|..|  |..   |||||.|| .
Mouse   602 ---QQSDFPRETFEGPKHEVLRRCLCAGYFKNVARRSVGRTFCTMDG--RGSPVHIHPSSALHEQ 661

  Fly   651 KYKPSYILFTEIVQTEQTFLRQVTEISIEWIKEVVP 686
            :.|..:|:|.|::.|.:.:.|.|..|..||:::::|
Mouse   662 ETKLEWIIFHEVLVTTKVYARIVCPIRYEWVRDLLP 697

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
athNP_609356.2 HrpA 67..>686 CDD:441249 248/653 (38%)
Dhx40NP_080467.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..53 6/31 (19%)
HrpA 51..>699 CDD:441249 249/656 (38%)
DEAH box 173..176 2/2 (100%)

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