DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4901 and Dhx40

DIOPT Version :9

Sequence 1:NP_001334733.1 Gene:CG4901 / 34357 FlyBaseID:FBgn0032194 Length:694 Species:Drosophila melanogaster
Sequence 2:NP_080467.3 Gene:Dhx40 / 67487 MGIID:1914737 Length:779 Species:Mus musculus


Alignment Length:686 Identity:255/686 - (37%)
Similarity:389/686 - (56%) Gaps:59/686 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 PILLTSKRTS----IEQQQK-----------SLPVFNCRHRILKELEANDTVLIMSETGSGKTTQ 100
            ||.|..:|.|    .::::|           :.|:...|.::::.:..|..:::...||||||||
Mouse    21 PIELQEERPSAVRIADREEKGCTSQEGGTTPTFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQ 85

  Fly   101 IPQFLLLAGYAKNGMIGITQPRRVAAITVARRVAQELNGTIGDTVGYTVRFEDVTSRATKIRFLT 165
            :|::|..||::::||||:||||:||||:||:|||:|:..|:|..|||.|||:|.:|:.|.|:::|
Mouse    86 LPKYLYEAGFSQHGMIGVTQPRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMT 150

  Fly   166 DGVLLRESIKDRLLLKYSVIILDEAHERTVNADLLFGIVKDAQKERRKQKLANLKVVVTSATMDI 230
            ||.||:..:.|..|.|:||||||||||||:..|:|||::|...:::...:..:|||||.||||::
Mouse   151 DGCLLKHILGDPNLSKFSVIILDEAHERTLTTDILFGLLKKLFQDKSPNRKEHLKVVVMSATMEL 215

  Fly   231 DHFGNYF-NCKGMYLEGRTYPVR------VMHTKEEHEDYIHTVLVTLFHIHRTTPKNHDVLIFL 288
            .....:| ||....:.||.||||      :.....|:..||..::.....||...... |:|:||
Mouse   216 AKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAG-DILVFL 279

  Fly   289 TGQEEIESLAQQIRQLAK-----IDTTGTT--DLRVFTLYAQLSQGKQLECFVPTPANVRKVILA 346
            |||.|||...:.:.|:|:     .|...||  .|.:...|..::..:|...|:|.|..:||.:::
Mouse   280 TGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVIS 344

  Fly   347 TNIAETSITIPGIRCVIDCGFVKEKSFNTVDGLDVLKSVRISKAQAWQRAGRAGRDADGTCYRAY 411
            |||:.||:||.|||.|:|.||||:.:.|...|||:|:.|.|||::|.||:|||||.|.|.|:|.|
Mouse   345 TNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTASGKCFRIY 409

  Fly   412 TKAEMDS-FADATQPEILRTNPTSMVLQLLALDI-DCNNFDFLDPPLEDGLRSAYKSLDALGAI- 473
            :|..... ..|...|||.||:.||:||.|..|.| |...|.:||||.|..:..|.|.|....|| 
Mouse   410 SKEFWSQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQCDAID 474

  Fly   474 KTGDDSYITPLGRQMVQYPLDPKYSKLLLTASSFGCMEEILSLVSVLSSDHVFVS--NSEKNEMA 536
            ::|   ::|.||..||::||.|..:..::.|:|..|.:.:|.:.::||.::||:.  :.|..:.|
Mouse   475 RSG---HVTRLGLSMVEFPLPPHLTCAVIRAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEA 536

  Fly   537 ALAHAKFQSKHG---DHLTLLNVFNGFLKSEKPKMWCHDNYLNLRSLTYARNVRRQLREISEHLH 598
            ...|.:..:|.|   |..||..:|.....|..|..||..::::.|.|..|..|..||||:...|.
Mouse   537 EQRHRELAAKAGGFNDFATLAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLK 601

  Fly   599 LALNSSD---------DIEMLKKCILNGFFENIAVLQRDGFYITASGNIRSK---IHPSSVLH-G 650
               ..||         ..|:|::|:..|:|:|:|.......:.|..|  |..   |||||.|| .
Mouse   602 ---QQSDFPRETFEGPKHEVLRRCLCAGYFKNVARRSVGRTFCTMDG--RGSPVHIHPSSALHEQ 661

  Fly   651 KYKPSYILFTEIVQTEQTFLRQVTEISIEWIKEVVP 686
            :.|..:|:|.|::.|.:.:.|.|..|..||:::::|
Mouse   662 ETKLEWIIFHEVLVTTKVYARIVCPIRYEWVRDLLP 697

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4901NP_001334733.1 None
Dhx40NP_080467.3 OB_NTP_bind 591..699 CDD:285018 35/112 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..53 6/31 (19%)
DEXDc 48..236 CDD:214692 84/187 (45%)
DEXDc 78..213 CDD:238005 74/134 (55%)
DEAH box 173..176 2/2 (100%)
HELICc 312..399 CDD:197757 39/86 (45%)
HA2 469..557 CDD:214852 26/90 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D354219at2759
OrthoFinder 1 1.000 - - FOG0000059
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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