DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4901 and dhx34

DIOPT Version :9

Sequence 1:NP_001334733.1 Gene:CG4901 / 34357 FlyBaseID:FBgn0032194 Length:694 Species:Drosophila melanogaster
Sequence 2:XP_017207416.1 Gene:dhx34 / 555838 ZFINID:ZDB-GENE-061207-30 Length:1154 Species:Danio rerio


Alignment Length:555 Identity:196/555 - (35%)
Similarity:316/555 - (56%) Gaps:31/555 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 SKRTSIEQQQKSLPVFNCRHRILKELEANDTVLIMSETGSGKTTQIPQFLLLAGYAKNGMIGITQ 120
            ||.:.:.::|||||:|..|.:|::.:..:..|::..:||.||:||:||:||.:|.   ..|..||
Zfish   150 SKLSKLRREQKSLPIFQYRDKIVELVRTHPVVVVAGDTGCGKSTQVPQYLLASGI---NNIACTQ 211

  Fly   121 PRRVAAITVARRVAQELNGTIGDTVGYTVRFEDVTSRATKIRFLTDGVLLRESIKDRLLLKYSVI 185
            |||:|.|::|:||:.|.....|..|||.:|||...:.|||:.|||:|:|||:..:|..|.:|.|:
Zfish   212 PRRIACISLAKRVSFESLNQYGSKVGYQIRFETSRTLATKLLFLTEGLLLRQIQQDASLGQYQVL 276

  Fly   186 ILDEAHERTVNADLLFGIVKDAQKERRKQKLANLKVVVTSATMDIDHFGNYFN-CKGMYLEGRTY 249
            |:||.|||.::.|.|.|:::.....|     .:|::|:.|||::|..|.:||| ...:.:.||.:
Zfish   277 IVDEVHERHLHCDFLLGVLRSLLSLR-----PDLRLVLMSATINIKLFSSYFNDAPVLQVPGRLF 336

  Fly   250 PVRVMHTKEEHEDYI--------HTVLVTLFHIHRTTPKNH--DVLIFLTGQEEIESLAQQIRQL 304
            |::|::.....|:.:        ...|..|..|.:..|:..  |:|:||:|..||.::.:..:..
Zfish   337 PIQVIYQPIPPEEQVSRSEKLDPRPYLRVLQGIDQRYPQEERGDLLLFLSGVAEISTIQEACQTY 401

  Fly   305 AKIDTTGTTDLRVFTLYAQLSQGKQLECFVPTPANVRKVILATNIAETSITIPGIRCVIDCGFVK 369
            |    |.|....|..|::.||..:|.:.|...|..|||.|::|||||||:||.|:|.|:|.|.||
Zfish   402 A----THTQRWIVLPLHSTLSLAQQDKVFDIAPPGVRKCIISTNIAETSVTIDGVRFVVDSGKVK 462

  Fly   370 EKSFNTVDGLDVLKSVRISKAQAWQRAGRAGRDADGTCYRAYTKAEMDSFADATQPEILRTNPTS 434
            |.||:....:..|:...||:|.:.||.|||||...|.|||.|::::.|:||....|||.|....|
Zfish   463 EMSFDPKAKMQRLQEFWISRASSEQRKGRAGRTGPGVCYRLYSESDYDAFAPYPVPEIHRVALDS 527

  Fly   435 MVLQLLALDI-DCNNFDFLDPPLEDGLRSAYKSLDALGAIKTGDDSYITPLGRQMVQYPLDPKYS 498
            ::||:.::.: |...|.|:|||....:::|...|...||:  .:...:|.:||.:.|.|:|....
Zfish   528 LILQMKSMGLGDPRTFTFIDPPPASSIQTAVTYLREQGAL--DEHGELTSIGRLLAQLPVDVVIG 590

  Fly   499 KLLLTASSFGCMEEILSLVSVLSSDHVFVSNSEKNEMAALAHAKFQSKHGDHLTLLNVFNGF--L 561
            |:|:..|.|..:|.:|::.:.||....|:.:::.|...:.|.....|.|||..||:|.||.:  :
Zfish   591 KMLVLGSVFNLVEPVLTVAAALSVQSPFLRSAQHNPDCSTARQPLNSNHGDPFTLMNTFNAWVQV 655

  Fly   562 KSEK---PKMWCHDNYLNLRSLTYARNVRRQLREI 593
            |:::   .:.||....|..:.|....|:|||.:|:
Zfish   656 KADRGSGSRKWCRRRGLEEQRLYEMVNLRRQFKEL 690



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.900

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