DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4901 and tdrd9

DIOPT Version :9

Sequence 1:NP_001334733.1 Gene:CG4901 / 34357 FlyBaseID:FBgn0032194 Length:694 Species:Drosophila melanogaster
Sequence 2:NP_001123984.1 Gene:tdrd9 / 553222 ZFINID:ZDB-GENE-090313-193 Length:1342 Species:Danio rerio


Alignment Length:716 Identity:201/716 - (28%)
Similarity:330/716 - (46%) Gaps:130/716 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 TSKRTSIEQQQKSLPVFNCRHRILKELEANDTVLIMSETGSGKTTQIPQFLLLAGYAKNGM---I 116
            ||..:....:...||:...|..::..:|.|..|:|...||||||||:||| :|..||:..:   :
Zfish    76 TSPPSLASYEYPILPITKNRQELVSLIENNSVVIIRGATGSGKTTQLPQF-ILDHYAERNIPCNL 139

  Fly   117 GITQPRRVAAITVARRVAQELNGTIGDTVGYTVRFEDVTSRATKIRFLTDGVLLRESIKDRLLLK 181
            .:||||::.|..:||.||:|...|:|..|||.|..|.:.:..||:.::|.||||::.:..:.|.:
Zfish   140 VVTQPRKIGATGIARWVARERKCTLGSLVGYQVGLEKMATEHTKLIYVTTGVLLQKLVSSKTLTE 204

  Fly   182 YSVIILDEAHERTVNADLLFGIVKDAQKERRKQKLANLKVVVTSATMDIDHFGNYF--------N 238
            ||.|.:||.|||:...|.|..:|:...:...:.    :||::.|||::...|..||        |
Zfish   205 YSHIFIDEVHERSEELDFLLLVVRKLLRSNSRY----VKVILMSATINCIEFAEYFGSPIRNQMN 265

  Fly   239 CKGMY-LEGRTYPVRVMHTKE---------------EHEDYI----HTVLVTLFHI--------H 275
            ...:: :||..|.|...:..|               ..:.||    :.|.|:|...        |
Zfish   266 PAYVFEVEGAPYAVEEYYLDELKTMLPVGVNLDLTLPQDPYITEEMYNVAVSLIQSFDEMEAKDH 330

  Fly   276 R--------TTPKNHDVLIFLTGQEEIESLAQQIRQLAKIDTTGTTDLRVFTLYAQLSQGKQLEC 332
            |        |.|:...||:||.|..||:.:.:.:.:|.:      ..|:|:.|::.::..:|...
Zfish   331 RRSEQTGSTTHPERGSVLVFLPGLAEIQYMKEALSKLVR------KRLQVYPLHSTVTLEEQNGV 389

  Fly   333 F-VPTPANVRKVILATNIAETSITIPGIRCVIDCGFVKEKSFNTVDGLDVLKSVRISKAQAWQRA 396
            | ||.| ..||:||:|||||:|:|:|.::.|||...|::.:.:.......|:....||....||.
Zfish   390 FLVPVP-GYRKIILSTNIAESSVTVPDVKYVIDFCLVRQLACDKETNYRCLRITWASKTSCNQRR 453

  Fly   397 GRAGRDADGTCYRAYTK----AEMDSFADATQPEILRTNPTSMVLQLLALDI-DCNNF--DFLDP 454
            |||||.:.|.|||..|:    .|:.:|   :.||:||:...|.:|::..||: |..:.  ..|.|
Zfish   454 GRAGRVSKGFCYRLVTRHFWENEIPNF---SIPEMLRSPLASTLLKVKLLDMGDPRSVLSTALTP 515

  Fly   455 PLEDGLRSAYKSLDALGAIKTGDDSY------ITPLGRQMVQYPLDPKYSKLLLTASSFGCMEEI 513
            |:...:......|..:||:....:|.      :|.|||.:.|.|:|.:..||::....|||:||.
Zfish   516 PILGDIERTVLQLKQIGALSVQSNSQRQFDGDLTFLGRVLAQLPVDLQLGKLIVLGHVFGCLEEC 580

  Fly   514 LSLVSVLSSDHVFVSNSEKNEMAALAHAKF-QSKHGDHLTLLNVF--------NGFLKSEKPKM- 568
            |.:.:.||....|...|.:......:...| |:...|.:..:|.|        .|.|:..|.:: 
Zfish   581 LIIAASLSLKSFFAMPSLQQLAGYRSKLSFAQNVPSDFIAYVNAFKAWYTSRAKGELRHPKDELE 645

  Fly   569 WCHDNYLNLRSLTYARNVRRQLREISEHLHLALNSSDDIEMLKKCILNGFFENIAVLQRDGFYIT 633
            |..:|.:.:          :::||::|.          .|.|||.:           .|...:|:
Zfish   646 WGKENCIQI----------KRIREVAEL----------FEDLKKRV-----------SRFNMHIS 679

  Fly   634 ASGNIR--SKIHPSS-----VLHGKYKPSYILFTEIVQTEQTFLRQVTEISIEWIKEVVPFVKNI 691
            :|.|..  :.:|...     |:.|...|:|....||  .||...:   |:|....|..: .::|:
Zfish   680 SSSNPTDYTSLHKQRFILQVVIAGALFPNYFSQGEI--DEQLASK---ELSGNDPKTTI-LIRNL 738

  Fly   692 P 692
            |
Zfish   739 P 739

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4901NP_001334733.1 None
tdrd9NP_001123984.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 31..81 2/4 (50%)
DEXDc 84..262 CDD:214692 65/182 (36%)
DEXDc 106..247 CDD:238005 56/145 (39%)
DEAH box. /evidence=ECO:0000250|UniProtKB:Q14BI7 211..214 2/2 (100%)
Helicase_C 343..459 CDD:278689 41/122 (34%)
HA2 530..622 CDD:214852 25/91 (27%)
TUDOR 851..972 CDD:278965
TUDOR 905..954 CDD:119391
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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