Protein Alignment ath and pea

DIOPT Version :10

• Sequence 1: NP_609356.2
• Gene: ath / 34357
• FlyBaseID: FBgn0032194
• Length: 694
• Species: Drosophila melanogaster
• Sequence 2: NP_610928.1
• Gene: pea / 36561
• FlyBaseID: FBgn0086895
• Length: 1242
• Species: Drosophila melanogaster
• Alignment Length: 675
• Identity: 278/675 - (41%)
• Similarity: 413/675 - (61%)
• Gaps: 24/675 - (3%)

  Fly    30 MANSP--ILEKKPHVAQIKQTIAPILLTSKRT--SIEQQQKSLPVFNCRHRILKELEANDTVLIM 90
            ||.:|  :.|.|.||...|::     ...|:|  ::.:|::|||::..|..::|.:..|..::::
  Fly   549 MAAAPPEVPEWKKHVIGGKKS-----SFGKKTDLTLVEQRQSLPIYKLRDDLIKAVTDNQILIVI 608

  Fly    91 SETGSGKTTQIPQFLLLAGYAKNGMIGITQPRRVAAITVARRVAQELNGTIGDTVGYTVRFEDVT 155
            .||||||||||.|:|...|:...|.||.||||||||::||:|||:|....:|..||||:||||.|
  Fly   609 GETGSGKTTQITQYLGECGFTARGKIGCTQPRRVAAMSVAKRVAEEYGCRLGQEVGYTIRFEDCT 673

  Fly   156 SRATKIRFLTDGVLLRESIKDRLLLKYSVIILDEAHERTVNADLLFGIVKDAQKERRKQKLANLK 220
            |..|.|:::|||:||||.:.:..|..||||:||||||||::.|:|||::|.|     .||...||
  Fly   674 SPETIIKYMTDGMLLRECLMEAELKSYSVIMLDEAHERTIHTDVLFGLLKTA-----VQKRPELK 733

  Fly   221 VVVTSATMDIDHFGNYFNCKGMY-LEGRTYPVRVMHTKEEHEDYIHTVLVTLFHIHRTTPKNHDV 284
            ::|||||:|...|..||....:: :.|||:||.|::|||...||:...|:|:..||...|.. |:
  Fly   734 LIVTSATLDAVKFSQYFFKAPIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHLREPPG-DI 797

  Fly   285 LIFLTGQEEIESLAQQIRQLAKIDTTGTTDLRVFTLYAQLSQGKQLECFVPTPANVRKVILATNI 349
            |:||||||||::..:.:.:..|.......:|.:..:|:.|....|...|.|.||..|||::||||
  Fly   798 LLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPAGSRKVVIATNI 862

  Fly   350 AETSITIPGIRCVIDCGFVKEKSFNTVDGLDVLKSVRISKAQAWQRAGRAGRDADGTCYRAYT-K 413
            ||||:||.||..|:|.||||:|.:|:..|:|.|....||:|.|.||||||||...|..||.|| :
  Fly   863 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQAAAKQRAGRAGRTGPGKTYRLYTER 927

  Fly   414 AEMDSFADATQPEILRTNPTSMVLQLLALDI-DCNNFDFLDPPLEDGLRSAYKSLDALGAIKTGD 477
            |..|.......|||.|||..:.||||..:.| |..:|||:|.|..:.|..|.:.|.:|.|:  .|
  Fly   928 AYRDEMLPTPVPEIQRTNLATTVLQLKTMGINDLLHFDFMDAPPVESLVMALEQLHSLSAL--DD 990

  Fly   478 DSYITPLGRQMVQYPLDPKYSKLLLTASSFGCMEEILSLVSVLSSDHVFVSNSEKNEMAALAHAK 542
            :..:|.|||:|.::||:|..||:|:.:.:..|.:|||::||:||..:||....:|..:|....||
  Fly   991 EGLLTRLGRRMAEFPLEPNLSKMLIMSVALQCSDEILTIVSMLSVQNVFYRPKDKQALADQKKAK 1055

  Fly   543 FQSKHGDHLTLLNVFNGFLKSEKPKMWCHDNYLNLRSLTYARNVRRQLREISEHLHL-ALNSSDD 606
            |....|||||||.|:|.:..::....||::|::.:|:|..:::||:||..|.:...| .:::..:
  Fly  1056 FNQAEGDHLTLLAVYNSWKNNKFSNAWCYENFVQIRTLKRSQDVRKQLLGIMDRHKLDVVSAGKN 1120

  Fly   607 IEMLKKCILNGFFENIAVLQRDGFYITASGNIRSKIHPSSVLHGKYKPSYILFTEIVQTEQTFLR 671
            ...::|.|.:|||.|.|.......|.|...:....|||||.|..: :|.::::.|:|||.:.::|
  Fly  1121 SVRIQKAICSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNR-QPEWVIYHELVQTTKEYMR 1184

  Fly   672 QVTEISIEWIKEVVP--FVKNIPTR 694
            :||.|..:|:.|..|  |..:.||:
  Fly  1185 EVTTIDPKWLVEFAPSFFRFSDPTK 1209

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ath	NP_609356.2	HrpA	67..>686	CDD:441249	263/622 (42%)
pea	NP_610928.1	GH2-like_DHX8	7..74	CDD:409668
		S1_DHX8_helicase	285..363	CDD:240189
		HrpA	578..>1203	CDD:441249	265/633 (42%)