DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4901 and Dhx35

DIOPT Version :9

Sequence 1:NP_001334733.1 Gene:CG4901 / 34357 FlyBaseID:FBgn0032194 Length:694 Species:Drosophila melanogaster
Sequence 2:XP_006235485.1 Gene:Dhx35 / 362260 RGDID:1311165 Length:703 Species:Rattus norvegicus


Alignment Length:648 Identity:274/648 - (42%)
Similarity:404/648 - (62%) Gaps:32/648 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 SIEQQQKSLPVFNCRHRILKELEANDTVLIMSETGSGKTTQIPQFLLLAGYAKNG-MIGITQPRR 123
            |||||::.||||..|:.||..:|...||:|:.|||.||:||:||:|..||:...| ::|:|||||
  Rat    46 SIEQQRQKLPVFKLRNHILYLVENYQTVVIVGETGCGKSTQVPQYLAEAGWTAEGRVVGVTQPRR 110

  Fly   124 VAAITVARRVAQELNGTIGDTVGYTVRFEDVTS-RATKIRFLTDGVLLRESIKDRLLLKYSVIIL 187
            |||:|||.|||.|....:|..|||.:||:|.|. .||:|:|||||:|:||.:.|.||.||||::|
  Rat   111 VAAVTVAGRVADERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDPLLTKYSVVML 175

  Fly   188 DEAHERTVNADLLFGIVKDAQKERRKQKLANLKVVVTSATMDIDHFGNYFN-----------CKG 241
            |||||||:..|:..|::|..||:|     .:|:::|.|||:|.:.|.::||           |..
  Rat   176 DEAHERTLYTDIAIGLLKKIQKKR-----GDLRLIVASATLDAEKFRDFFNQNETSDPARDTCVI 235

  Fly   242 MYLEGRTYPVRVMHTKEEHEDYIHTVLVTLFHIHRTTPKNHDVLIFLTGQEEIES----LAQQIR 302
            :.:||||:||.:.:.:....|||...:.|:..||: |..:.|:|.|||||||:|:    |.:|.|
  Rat   236 LTVEGRTFPVDIFYLQSPVPDYIKATVDTVVKIHQ-TEGDGDILAFLTGQEEVETVVSMLIEQAR 299

  Fly   303 QLAKIDTTG-TTDLRVFTLYAQLSQGKQLECFVPTPANVRKVILATNIAETSITIPGIRCVIDCG 366
            .||:   || ...|||..:||.|...:|::.|.....:|||||:|||:|||||||.||..|||||
  Rat   300 ALAR---TGMKKHLRVLPMYAGLPSFEQMKVFERVSHSVRKVIVATNVAETSITISGIVYVIDCG 361

  Fly   367 FVKEKSFNTVDGLDVLKSVRISKAQAWQRAGRAGRDADGTCYRAYTKAEMDSFADATQPEILRTN 431
            |:|.:::|....::.|..|.:|:|.|.|||||.||:..|.|||.||:...:....:|.||:.|:|
  Rat   362 FMKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRNRSGKCYRLYTEEAFEQLPQSTVPEMQRSN 426

  Fly   432 PTSMVLQLLALDID-CNNFDFLDPPLEDGLRSAYKSLDALGAIKTGDDSYIT-PLGRQMVQYPLD 494
            ...:||||.||.|| ...|.|:.||....:..|.:.|.|||.:  ..|..:| |||.::.::||:
  Rat   427 LAPVVLQLKALGIDSVLRFHFMSPPPAQSMVQALELLYALGGL--DKDCRLTEPLGMRIAEFPLN 489

  Fly   495 PKYSKLLLTASSFGCMEEILSLVSVLSSDHVFVSNSEKNEMAALAHAKFQSKHGDHLTLLNVFNG 559
            |.::|:||.:.:|||.:||||:.:::...:|||..|.:...|...|.||..:.|||||:|||:..
  Rat   490 PMFAKMLLESGNFGCSQEILSIAAMMQIQNVFVFPSNQKSQATRVHRKFAVEEGDHLTMLNVYEA 554

  Fly   560 FLKSEKPKMWCHDNYLNLRSLTYARNVRRQLREISEHLHL-ALNSSDDIEMLKKCILNGFFENIA 623
            |:|..|...||.:::||.:.|..|..||.||:::.....: .::|..|.:.:.:||::|||.|.|
  Rat   555 FIKHNKSSQWCQEHFLNYKGLVRAATVRDQLKKLLVKFQVPKMSSEGDPDPVLRCIVSGFFANAA 619

  Fly   624 VLQRDGFYITASGNIRSKIHPSSVLHGKYKPSYILFTEIVQTEQTFLRQVTEISIEWIKEVVP 686
            .....|.|.|...:....|||:|||:.:..|.::::.|::||.:.::|.||.|...|:.|:.|
  Rat   620 RFHSTGAYRTIRDDHELHIHPASVLYAEKPPRWVIYNEVIQTSKYYMRDVTAIESAWLLELAP 682

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4901NP_001334733.1 None
Dhx35XP_006235485.1 DEXDc 53..224 CDD:214692 89/175 (51%)
DEXDc 73..211 CDD:238005 75/142 (53%)
HELICc 301..396 CDD:197757 47/97 (48%)
HA2 465..549 CDD:214852 34/85 (40%)
OB_NTP_bind 584..683 CDD:285018 31/99 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53574
OrthoDB 1 1.010 - - D354219at2759
OrthoFinder 1 1.000 - - FOG0000059
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100085
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.730

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