DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4901 and Rhau

DIOPT Version :9

Sequence 1:NP_001334733.1 Gene:CG4901 / 34357 FlyBaseID:FBgn0032194 Length:694 Species:Drosophila melanogaster
Sequence 2:NP_001260639.1 Gene:Rhau / 35339 FlyBaseID:FBgn0032883 Length:942 Species:Drosophila melanogaster


Alignment Length:720 Identity:199/720 - (27%)
Similarity:334/720 - (46%) Gaps:129/720 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 QQQKSLPVFNCRHRILKELEANDTVLIMSETGSGKTTQIPQFLL----LAGYAKNGMIGITQPRR 123
            :.:|.||.......|::.:..|..:||:..||.|||||:||.||    ..|.|.:..|..|||||
  Fly   148 EARKKLPTMKYADDIIQAVRENQVILIVGSTGCGKTTQVPQILLDDAISRGCASSCRIICTQPRR 212

  Fly   124 VAAITVARRVAQELNGTIGDTVGYTVRFEDVTSR-ATKIRFLTDGVLLRESIKDRLLLKYSVIIL 187
            ::||.:|..|:.|...::|::|||.:|.|...:| ...|.:.|.||||::...|.|:...||:||
  Fly   213 ISAIAIAEWVSYERCESLGNSVGYQIRLESRKARERASITYCTTGVLLQQLQSDPLMHNLSVLIL 277

  Fly   188 DEAHERTVNADLLFGIVKDAQKERRKQKLANLKVVVTSATMDIDHFGNYF-NCKGMYLEGRTYPV 251
            ||.|||:|..|||.|::|.....|     .:|||::.|||:....|.:|| ||....:||..:||
  Fly   278 DEIHERSVETDLLMGLLKVILPHR-----PDLKVILMSATVREQDFCDYFNNCPMFRIEGVMFPV 337

  Fly   252 RVMHTKE--------------------------EHEDYIHTVLVTL------------------- 271
            ::::.::                          :||..|...|..:                   
  Fly   338 KMLYLEDVLSKTNYEFQKFRDRRPKRDPPERRMKHEAMIEPYLRRIRNSYDSRVLDKLRLPESEG 402

  Fly   272 -----------FHIHRTTPKNHDVLIFLTGQEEIESLAQQIRQLAKIDTTGTT-------DLRVF 318
                       ::|....|:. .:|:||.|.::|..|..      .:|...|:       .:.||
  Fly   403 CEDIDFIADLVYYICENEPEG-AILVFLPGYDKISQLYN------ILDKPKTSKGQRWRDHMAVF 460

  Fly   319 TLYAQLSQGKQLECFVPTPANVRKVILATNIAETSITIPGIRCVIDCGFVKEKSFNTVDGLDVLK 383
            .|::.:..|:|...|...||..||||::|.|||||:||..:..||:.|..|..:::....:..|.
  Fly   461 PLHSLMQSGEQQAVFRRPPAGQRKVIISTIIAETSVTIDDVVYVINSGRTKATNYDIETNIQSLD 525

  Fly   384 SVRISKAQAWQRAGRAGRDADGTCYRAYTKAEMDSFADATQPEILRTNPTSMVLQLLALDIDCNN 448
            .|.::||...||.|||||...|.||..:::|..|...|...|||||:...|::|.|..|.|| :.
  Fly   526 EVWVTKANTQQRRGRAGRVRPGICYNLFSRAREDRMDDIPTPEILRSKLESIILSLKLLHID-DP 589

  Fly   449 FDFL----DPPLEDGLRSAYKSLDALGAI-KTGDDSYITPLGRQMVQYPLDPKYSKLLLTASSFG 508
            :.||    :.|..:.::...:.|..:.|: :||.   :||||..:.:.|:||:..|::|.::.|.
  Fly   590 YRFLQTLINAPNPEAIKMGVELLKRIEALDQTGT---LTPLGMHLAKLPIDPQMGKMILMSALFC 651

  Fly   509 CMEEILSLVSVLSSDHVFVSN-SEKNEMAALAHAKFQSKHGDHLTLLNVFNGFLK---SEKPKMW 569
            |::.|.|..:.||....|.|. .:::.:..:.....::...|||.:.|....:..   |...:.:
  Fly   652 CLDPITSAAAALSFKSPFYSPLGKESRVDEIKRRMARNMRSDHLMVHNTIIAYRDSRYSHAERDF 716

  Fly   570 CHDNYLNLRSLTYARNVRRQLREISEHLHLALNS----------SDDIEMLKKCILNGFFENIAV 624
            |:.|:|:..:|.....::.|..|:..:.....:|          |:.|.:|:..|..|.:.|:|.
  Fly   717 CYKNFLSSMTLQQLERMKNQFSELLYNYKFLASSNCKDAASNKNSEKIPLLRAIIGAGLYPNMAH 781

  Fly   625 LQRDGFYITASGNIRSKI----------------HPSSVLHGK--YKPSYILFTEIVQTEQTFLR 671
            |::       |..|::::                |||||..|:  :..:|.::.:..::...||.
  Fly   782 LRK-------SRQIKNRVRAIHTMATDDGRRVNFHPSSVNSGESGFDSAYFVYFQRQKSTDLFLL 839

  Fly   672 QVTEI 676
            ..|.:
  Fly   840 DSTMV 844

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4901NP_001334733.1 None
RhauNP_001260639.1 DEXDc 147..328 CDD:214692 73/184 (40%)
DEXDc 170..312 CDD:238005 61/146 (42%)
Helicase_C 411..544 CDD:278689 44/139 (32%)
HA2 614..696 CDD:214852 22/84 (26%)
OB_NTP_bind 735..853 CDD:285018 23/117 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45468073
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 234 1.000 Inparanoid score I130
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR18934
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.890

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