DRSC/TRiP Functional Genomics Resources

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Protein Alignment ath and Rhau

DIOPT Version :10

Sequence 1:NP_609356.2 Gene:ath / 34357 FlyBaseID:FBgn0032194 Length:694 Species:Drosophila melanogaster
Sequence 2:NP_610056.1 Gene:Rhau / 35339 FlyBaseID:FBgn0032883 Length:942 Species:Drosophila melanogaster


Alignment Length:720 Identity:199/720 - (27%)
Similarity:334/720 - (46%) Gaps:129/720 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 QQQKSLPVFNCRHRILKELEANDTVLIMSETGSGKTTQIPQFLL----LAGYAKNGMIGITQPRR 123
            :.:|.||.......|::.:..|..:||:..||.|||||:||.||    ..|.|.:..|..|||||
  Fly   148 EARKKLPTMKYADDIIQAVRENQVILIVGSTGCGKTTQVPQILLDDAISRGCASSCRIICTQPRR 212

  Fly   124 VAAITVARRVAQELNGTIGDTVGYTVRFEDVTSR-ATKIRFLTDGVLLRESIKDRLLLKYSVIIL 187
            ::||.:|..|:.|...::|::|||.:|.|...:| ...|.:.|.||||::...|.|:...||:||
  Fly   213 ISAIAIAEWVSYERCESLGNSVGYQIRLESRKARERASITYCTTGVLLQQLQSDPLMHNLSVLIL 277

  Fly   188 DEAHERTVNADLLFGIVKDAQKERRKQKLANLKVVVTSATMDIDHFGNYF-NCKGMYLEGRTYPV 251
            ||.|||:|..|||.|::|.....|     .:|||::.|||:....|.:|| ||....:||..:||
  Fly   278 DEIHERSVETDLLMGLLKVILPHR-----PDLKVILMSATVREQDFCDYFNNCPMFRIEGVMFPV 337

  Fly   252 RVMHTKE--------------------------EHEDYIHTVLVTL------------------- 271
            ::::.::                          :||..|...|..:                   
  Fly   338 KMLYLEDVLSKTNYEFQKFRDRRPKRDPPERRMKHEAMIEPYLRRIRNSYDSRVLDKLRLPESEG 402

  Fly   272 -----------FHIHRTTPKNHDVLIFLTGQEEIESLAQQIRQLAKIDTTGTT-------DLRVF 318
                       ::|....|:. .:|:||.|.::|..|..      .:|...|:       .:.||
  Fly   403 CEDIDFIADLVYYICENEPEG-AILVFLPGYDKISQLYN------ILDKPKTSKGQRWRDHMAVF 460

  Fly   319 TLYAQLSQGKQLECFVPTPANVRKVILATNIAETSITIPGIRCVIDCGFVKEKSFNTVDGLDVLK 383
            .|::.:..|:|...|...||..||||::|.|||||:||..:..||:.|..|..:::....:..|.
  Fly   461 PLHSLMQSGEQQAVFRRPPAGQRKVIISTIIAETSVTIDDVVYVINSGRTKATNYDIETNIQSLD 525

  Fly   384 SVRISKAQAWQRAGRAGRDADGTCYRAYTKAEMDSFADATQPEILRTNPTSMVLQLLALDIDCNN 448
            .|.::||...||.|||||...|.||..:::|..|...|...|||||:...|::|.|..|.|| :.
  Fly   526 EVWVTKANTQQRRGRAGRVRPGICYNLFSRAREDRMDDIPTPEILRSKLESIILSLKLLHID-DP 589

  Fly   449 FDFL----DPPLEDGLRSAYKSLDALGAI-KTGDDSYITPLGRQMVQYPLDPKYSKLLLTASSFG 508
            :.||    :.|..:.::...:.|..:.|: :||.   :||||..:.:.|:||:..|::|.::.|.
  Fly   590 YRFLQTLINAPNPEAIKMGVELLKRIEALDQTGT---LTPLGMHLAKLPIDPQMGKMILMSALFC 651

  Fly   509 CMEEILSLVSVLSSDHVFVSN-SEKNEMAALAHAKFQSKHGDHLTLLNVFNGFLK---SEKPKMW 569
            |::.|.|..:.||....|.|. .:::.:..:.....::...|||.:.|....:..   |...:.:
  Fly   652 CLDPITSAAAALSFKSPFYSPLGKESRVDEIKRRMARNMRSDHLMVHNTIIAYRDSRYSHAERDF 716

  Fly   570 CHDNYLNLRSLTYARNVRRQLREISEHLHLALNS----------SDDIEMLKKCILNGFFENIAV 624
            |:.|:|:..:|.....::.|..|:..:.....:|          |:.|.:|:..|..|.:.|:|.
  Fly   717 CYKNFLSSMTLQQLERMKNQFSELLYNYKFLASSNCKDAASNKNSEKIPLLRAIIGAGLYPNMAH 781

  Fly   625 LQRDGFYITASGNIRSKI----------------HPSSVLHGK--YKPSYILFTEIVQTEQTFLR 671
            |::       |..|::::                |||||..|:  :..:|.::.:..::...||.
  Fly   782 LRK-------SRQIKNRVRAIHTMATDDGRRVNFHPSSVNSGESGFDSAYFVYFQRQKSTDLFLL 839

  Fly   672 QVTEI 676
            ..|.:
  Fly   840 DSTMV 844

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
athNP_609356.2 HrpA 67..>686 CDD:441249 198/716 (28%)
RhauNP_610056.1 HrpA 160..>664 CDD:441249 160/519 (31%)
OB_NTP_bind 767..856 CDD:400182 18/85 (21%)

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