DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ath and CG8915

DIOPT Version :10

Sequence 1:NP_609356.2 Gene:ath / 34357 FlyBaseID:FBgn0032194 Length:694 Species:Drosophila melanogaster
Sequence 2:NP_573208.1 Gene:CG8915 / 32715 FlyBaseID:FBgn0030833 Length:976 Species:Drosophila melanogaster


Alignment Length:704 Identity:198/704 - (28%)
Similarity:333/704 - (47%) Gaps:86/704 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 IKQTIAPILLTSKRTSIEQQQKSLPVFNCRHRILKELEANDTVLIMSETGSGKTTQIPQFLL--L 107
            :.|.:.|...:::..:|:.:::|||::..|..||..|:.:..::|...|||||:||:||::|  .
  Fly   186 VGQRLIPPPQSNRNRNIQHERRSLPIYKQRESILNVLQRDQVLIIKGATGSGKSTQLPQYILEWA 250

  Fly   108 AGYAKNGMIGITQPRRVAAITVARRVAQELNGTIGDTVGYTVRFEDVTSRATKIRFLTDGVLLRE 172
            |.:.....|.::||||:|||:|:.|:::|.....|.||||.:|.....|..|.:...|.|.|||.
  Fly   251 AEHRAPVRIVVSQPRRIAAISVSERISKERGEAPGTTVGYNIRMNRQCSSNTVLMLTTSGCLLRA 315

  Fly   173 SIKDR--LLLKYSVIILDEAHERTVNADLLFGIVKDAQKERRKQKLANLKVVVTSATMDIDHFGN 235
            ...|:  .....:.:|:||||||.::.|.|....|     ...||..:|::|:.|||||::...|
  Fly   316 LAMDKKSFFKNTTHLIIDEAHERDLDTDFLLLATK-----LELQKNPHLRLVLMSATMDLEALSN 375

  Fly   236 YFNCKG---MYLEGRTYPVRV------------MHTKEE-------------------------- 259
            ||.  |   |.:|||::.|.:            ||.:.|                          
  Fly   376 YFG--GGTVMDVEGRSFEVSIYHLEDILSKTGYMHPRMEKFLGKPTGKETPSELLAAYYGGNTIV 438

  Fly   260 HEDYIHTVLVTLFHIHRTTPKNHDVLIFLTGQEEIESLAQQIRQLAKIDTT-GTTDLRVFTLYAQ 323
            |.|..:.::|:|..:.........|:::|.|..::.||      ||::::: ....:.:..|::|
  Fly   439 HPDIDNDLIVSLLELLLRQGDAGAVIVYLPGYSDMTSL------LARLESSLPREQITIILLHSQ 497

  Fly   324 LSQGKQLECFVPTPANVRKVILATNIAETSITIPGIRCVIDCGFVKEKSFNTVDGLDVLKSVRIS 388
            :...:|.:.|...|....|:||:|||.:||||||.:..|||.|..|.|::::......|....||
  Fly   498 VDNSEQRKVFRTYPGVRLKIILSTNIGQTSITIPDLLYVIDTGLAKMKTYDSTIDASQLTLTWIS 562

  Fly   389 KAQAWQRAGRAGRDADGTCYRAYTKAEMDSFADATQPEILR--TNPTSMVLQLLALDIDCNNF-- 449
            :|.|.||||||||...|.|||.|....|......|.|||:|  .:...::.:|.|.|....||  
  Fly   563 QADAKQRAGRAGRVCHGNCYRLYDNDRMARMNLYTIPEIMRRTLDEICLLTKLAAPDKKIENFLA 627

  Fly   450 DFLDPPLEDGLRSAYKSLDALGAIKTGDDSYITPLGRQMVQYPLDPKYSKLLLTASSFGCMEEIL 514
            ..||.|.:|.:..:...|..||.:...|:  :||||..:.:.||..:..|.|:.:....|::.::
  Fly   628 LALDTPPKDAVMQSCSRLKLLGVLDERDE--VTPLGHIVAELPLGVQIGKCLVYSIYLRCLDSMI 690

  Fly   515 SLVSVLSSDHVFVSNSEKNEMAA--LAHAKFQSK-HGDHLTLLNVFNGF--LKSEKPKMWCHDNY 574
            .:.:..|....||.|.|:.:.:.  ::...|... ..|.|.::.::..|  ||.:....:|..|:
  Fly   691 IIAAYHSVRDPFVLNIERGKKSGQQISRVLFAGDGMSDSLAVIKLYEEFTNLKRKDIGDFCERNF 755

  Fly   575 LNLRSL--------TYARNVRRQLREISEHLHLALNSSDDIEMLKKCILNGFFENIAVLQRDG-F 630
            :...::        |....|.|..|.......||.:.::|..|::..:..|.:..:|.:.|:. .
  Fly   756 ICRNAMEMFVSAASTLRDTVYRIFRFSEASARLASSFNNDTNMIRLALTAGLYPKLAYMDRENKN 820

  Fly   631 YITASGNIRSKIHPSSVLHGKYK-----PSYILFTEIVQT--EQTFLRQVTEIS 677
            .:.|.|:...::..||.|.||.|     ..:|||.|..:|  :.:.|...|.:|
  Fly   821 QLVAEGDPLVQVSRSSCLRGKKKQKDLASEWILFVEKTRTADQISSLEHTTLVS 874

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
athNP_609356.2 HrpA 67..>686 CDD:441249 195/682 (29%)
CG8915NP_573208.1 R3H 67..123 CDD:460206
HrpA 208..>702 CDD:441249 156/508 (31%)
OB_NTP_bind 799..884 CDD:400182 19/76 (25%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.