DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4901 and CG1582

DIOPT Version :9

Sequence 1:NP_001334733.1 Gene:CG4901 / 34357 FlyBaseID:FBgn0032194 Length:694 Species:Drosophila melanogaster
Sequence 2:NP_001285098.1 Gene:CG1582 / 32021 FlyBaseID:FBgn0030246 Length:1288 Species:Drosophila melanogaster


Alignment Length:821 Identity:228/821 - (27%)
Similarity:355/821 - (43%) Gaps:176/821 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 TSRNDAVGPSPVKFSFKRKYDAMA--NSPILEKKPHVAQIKQTIAPILLTSKRTSIEQQQKSLPV 70
            |||||.        ..:|..:|..  |..:|::  .|.:.|:        .:...|...:|.||.
  Fly   409 TSRNDG--------GHQRNVEAQTRENRRLLQQ--FVERRKE--------ERYQKIIDGRKQLPA 455

  Fly    71 FNCRHRILKELEANDTVLIMSETGSGKTTQIPQFLL-------LAGYAKNGM----IGITQPRRV 124
            |....|||..:|::..|:|..|||.||:||:|||:|       |...||..:    |..|||||:
  Fly   456 FAEIERILALIESSPVVVISGETGCGKSTQVPQFILDNWFFRALQLPAKENLPHVEIICTQPRRL 520

  Fly   125 AAITVARRVAQELNGTIGDTVGYTVRFEDVTSRATKIRFLTDGVLLRESIKDRLLLKYSVIILDE 189
            :||.||.|||.|....||..|||.:|.|:..|::|::.|.|.|:|||....|.||...:.:|:||
  Fly   521 SAIGVAERVAAERLDRIGQLVGYQIRLENKVSQSTRLSFCTTGILLRRLASDPLLGSVTHVIVDE 585

  Fly   190 AHERTVNADLLFGIVKDAQKERRKQKLANLKVVVTSATMDIDHFGNYF-NCKGMYLEGRTYPVR- 252
            .|||:..:|.|..|:|:..:||:     :|||::.|||::...|.:|| ....:.:.|||:||: 
  Fly   586 VHERSEESDFLLLILKNLLRERK-----DLKVILMSATLNAALFSDYFGGAPVLDIPGRTFPVQQ 645

  Fly   253 ------------VMH---------TKEEHE----------------------------------- 261
                        ||.         .|:|.|                                   
  Fly   646 LFLEDILEMSDFVMEYDTKYCRKLKKQEQEILERELEYADVQASGEAPGKKIKDEKLTLAETYQR 710

  Fly   262 ----------------------DYIHTVLVTLFHIHRTTPKNHDVLIFLTGQEEIESLAQQIRQL 304
                                  :.|.:||..:.......|:...:||||.|..||:|:...:...
  Fly   711 YAEYSKPTCKSIYLMEPMTINPELIESVLKYIVEGSHDWPREGTILIFLPGFGEIQSVHDSLLDN 775

  Fly   305 AKIDTTGTTDLRVFTLYAQLSQGKQLECFVPTPANVRKVILATNIAETSITIPGIRCVIDCGFVK 369
            |.........:.| .|::.||...|...|...|...||::|:|||||||:||.....|:|||.:|
  Fly   776 ALFSPRAGKFILV-PLHSALSGEDQALVFKKAPPGKRKIVLSTNIAETSVTIDDCVFVVDCGLMK 839

  Fly   370 EKSFNTVDGLDVLKSVRISKAQAWQRAGRAGRDADGTCYRAYTKAEMDSFADATQ-PEILRTNPT 433
            ||.|::...::.|..|.:|:|.|.||.|||||...|.|...||.........|.. |||.|....
  Fly   840 EKCFDSNRNMESLDLVWVSRANAKQRKGRAGRVMPGVCIHLYTSYRYQYHILAQPVPEIQRVPLE 904

  Fly   434 SMVLQLLALDIDCNN------FDFLDPPLEDGLRSAYKSLDALGAIKTGDDSYITPLGRQMVQYP 492
            .:||::..|....:.      .:.|:.|.||.:..|...|..:||:...|.  :||||..:...|
  Fly   905 QIVLRIKTLQTFASRNTLSVLLETLEAPTEDSVLGALTRLRDVGALDAEDQ--LTPLGHHLAALP 967

  Fly   493 LDPKYSKLLLTASSFGCMEEILSLVSVLSSDHVFVSNSEKNEMAALAHAKFQSKHGDHLTLLNVF 557
            :|.:..||:|..:.|.|::.:|::.:.||:...|||...|...|......|...:.||||:||.:
  Fly   968 VDVRIGKLMLYGAIFQCLDSVLTIAACLSNKSPFVSPLNKRTEADKCKRMFALGNSDHLTVLNAY 1032

  Fly   558 NGFLKSEK------PKMWCHDNYLNLRSLTYARNVRRQLREISEHLHLA--------LNSSDDI- 607
            ..:|...:      .:.:..:::|:|.:|....:::.|..|:...:...        .|:.|:| 
  Fly  1033 RKWLDVARRGNYAASRNYASEHFLSLNTLETIADLKYQYLELLVSIGFVPIDVPRRRKNACDNIL 1097

  Fly   608 --------------EMLKKCILNGFFENIA-VLQRDGFYI-TASGNIRS---------------- 640
                          .:|...:....:.||. ::..|..|| ||.|.:..                
  Fly  1098 TLTGVEQNHNGDNNRLLTSLLCAALYPNIVKIMTPDRVYIQTAGGAVPREPSHHDLRFKTRGDGY 1162

  Fly   641 -KIHPSSVLH--GKYKPSYILFTEIVQTEQTFLRQVTEISI 678
             |||||||..  ..::..:::|.|.|:|...::|..:.:.:
  Fly  1163 VKIHPSSVNSQVSVFQAPFLVFQEKVRTSAIYIRDCSMLPL 1203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4901NP_001334733.1 None
CG1582NP_001285098.1 UBA_like_SF 123..154 CDD:304366
zf-CCCH 250..272 CDD:279036
RWD <284..360 CDD:283440
HrpA 419..1206 CDD:224557 222/803 (28%)
DEXDc 471..619 CDD:238005 65/152 (43%)
HELICc 781..871 CDD:197757 37/90 (41%)
HA2 948..1029 CDD:214852 27/82 (33%)
OB_NTP_bind 1070..1212 CDD:285018 26/134 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45468074
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR18934
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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