DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4901 and Dhx38

DIOPT Version :9

Sequence 1:NP_001334733.1 Gene:CG4901 / 34357 FlyBaseID:FBgn0032194 Length:694 Species:Drosophila melanogaster
Sequence 2:XP_006255639.1 Gene:Dhx38 / 292007 RGDID:1310345 Length:1227 Species:Rattus norvegicus


Alignment Length:643 Identity:259/643 - (40%)
Similarity:391/643 - (60%) Gaps:18/643 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 SKRTSIEQQQKSLPVFNCRHRILKELEANDTVLIMSETGSGKTTQIPQFLLLAGYAKNGMIGITQ 120
            :|:.||.:|::.||:|..:..:|..:..|..|:::.|||||||||:.|:|...||...||||.||
  Rat   520 AKKKSILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHQDGYTDYGMIGCTQ 584

  Fly   121 PRRVAAITVARRVAQELNGTIGDTVGYTVRFEDVTSRATKIRFLTDGVLLRESIKDRLLLKYSVI 185
            ||||||::||:||::|:.|.:|:.|||.:||||.||..|.|:::|||:|||||:::..|..||.|
  Rat   585 PRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSENTLIKYMTDGILLRESLREADLDHYSAI 649

  Fly   186 ILDEAHERTVNADLLFGIVKDAQKERRKQKLANLKVVVTSATMDIDHFGNYF-NCKGMYLEGRTY 249
            |:||||||::|.|:|||::::....|     ::||::|||||||.|.|..:| |....::.|||:
  Rat   650 IMDEAHERSLNTDVLFGLLREVVARR-----SDLKLIVTSATMDADKFAAFFGNVPIFHIPGRTF 709

  Fly   250 PVRVMHTKEEHEDYIHTVLVTLFHIHRTTPKNHDVLIFLTGQEEIESLAQQI-RQLAKIDTTGTT 313
            ||.::.:|...|||:...:.....:|.:.... |:|||:.|||:||..:.|| ..|.:::.... 
  Rat   710 PVDILFSKTPQEDYVEAAVKQSLQVHLSGAPG-DILIFMPGQEDIEVTSDQIVEHLEELENAPA- 772

  Fly   314 DLRVFTLYAQLSQGKQLECFVPTPANVRKVILATNIAETSITIPGIRCVIDCGFVKEKSFNTVDG 378
             |.|..:|:||....|.:.|...|..|||.|:||||||||:|:.||..|||.|:.|.|.||...|
  Rat   773 -LAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIG 836

  Fly   379 LDVLKSVRISKAQAWQRAGRAGRDADGTCYRAYTK-AEMDSFADATQPEILRTNPTSMVLQLLAL 442
            :|.|:...||:|.|.||:|||||...|.|:|.||: |..:.....|.|||.|||..::||.|.:|
  Rat   837 MDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSL 901

  Fly   443 DI-DCNNFDFLDPPLEDGLRSAYKSLDALGAI-KTGDDSYITPLGRQMVQYPLDPKYSKLLLTAS 505
            .: |...|.|:|||.||.:.::...|..|||: .||.   :|..||.||::||||..||:|:.:.
  Rat   902 GVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGG---LTSTGRLMVEFPLDPALSKMLIVSC 963

  Fly   506 SFGCMEEILSLVSVLSSDHVFVSNSEKNEMAALAHAKFQSKHGDHLTLLNVFNGFLKSEKPKMWC 570
            ..||..|||.:||:||...:|.....:.|.:.....||.....||||.|||:..:..:....:||
  Rat   964 DMGCSSEILLIVSMLSVPAIFYRPKGREEESDQIREKFAVPESDHLTYLNVYLQWKNNNYSTIWC 1028

  Fly   571 HDNYLNLRSLTYARNVRRQLREISEHLHLALNS-SDDIEMLKKCILNGFFENIAVLQRDGFYITA 634
            :|::::.:::...|.||.||::|.....::|.| ..|.::::|||...:|...|.|:..|.|:..
  Rat  1029 NDHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCGTDWDIVRKCICAAYFHQAAKLKGIGEYVNI 1093

  Fly   635 SGNIRSKIHPSSVLHGK-YKPSYILFTEIVQTEQTFLRQVTEISIEWIKEVVPFVKNI 691
            ...:...:||:|.|.|. |.|.||::.|:|.|.:.:::.||.:..||:.|:.|...::
  Rat  1094 RTGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSV 1151

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4901NP_001334733.1 None
Dhx38XP_006255639.1 DUF3984 <190..>299 CDD:289881
DEXDc 526..713 CDD:214692 93/191 (49%)
DEXDc 551..687 CDD:238005 75/140 (54%)
HELICc 758..861 CDD:197757 48/104 (46%)
HA2 930..1012 CDD:214852 34/84 (40%)
OB_NTP_bind <1063..1146 CDD:285018 26/82 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D354219at2759
OrthoFinder 1 1.000 - - FOG0000059
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100085
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.720

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