DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4901 and Dhx15

DIOPT Version :9

Sequence 1:NP_001334733.1 Gene:CG4901 / 34357 FlyBaseID:FBgn0032194 Length:694 Species:Drosophila melanogaster
Sequence 2:NP_001178526.1 Gene:Dhx15 / 289693 RGDID:1308072 Length:795 Species:Rattus norvegicus


Alignment Length:706 Identity:278/706 - (39%)
Similarity:417/706 - (59%) Gaps:45/706 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 AVGPSPVKFSFKRKYDAMANSPILEKKPHV--------AQIKQTIAP---ILLTSKRTSIEQQQK 66
            :.|..|:|.|........|:|.......|.        ..:.|.|.|   :..|.:...|.:::.
  Rat    71 SAGLPPLKASHSAHSTHSAHSTHSTHSAHSTHTGHAGHTSLPQCINPFTNLPHTPRYYDILKKRL 135

  Fly    67 SLPVFNCRHRILKELEANDTVLIMSETGSGKTTQIPQFLL-----LAGYAKNGMIGITQPRRVAA 126
            .|||:..:.|....|..:.:.:::.||||||||||||:.:     |.| .|.| :..||||||||
  Rat   136 QLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPG-PKRG-VACTQPRRVAA 198

  Fly   127 ITVARRVAQELNGTIGDTVGYTVRFEDVTSRATKIRFLTDGVLLRESIKDRLLLKYSVIILDEAH 191
            ::||:|||.|::..:|..|||::||||.:|..|.::::|||:||||::.|.||.:|.||||||||
  Rat   199 MSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAH 263

  Fly   192 ERTVNADLLFGIVKDAQKERRKQKLANLKVVVTSATMDIDHFGNYF-NCKGMYLEGRTYPVRVMH 255
            |||:..|:|.|::|:..::|     ::|||:|.|||:|...|..|| ||..:.:.|||:||.:.:
  Rat   264 ERTLATDILMGVLKEVVRQR-----SDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFY 323

  Fly   256 TKEEHEDYIHTVLVTLFHIHRTTPKNHDVLIFLTGQEEIESLAQQIRQLAKIDTTG--TTDLRVF 318
            |.|...||:...:.|:..||....:..|:|:||||||||:...::|::  ::|..|  ..|:::.
  Rat   324 TPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKR--EVDDLGPEVGDIKII 386

  Fly   319 TLYAQLSQGKQLECFVPTP------ANVRKVILATNIAETSITIPGIRCVIDCGFVKEKSFNTVD 377
            .||:.|...:|...|.|.|      |..|||:::|||||||:||.|:..|||.||.|:|.:|...
  Rat   387 PLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRI 451

  Fly   378 GLDVLKSVRISKAQAWQRAGRAGRDADGTCYRAYT-KAEMDSFADATQPEILRTNPTSMVLQLLA 441
            .::.|....||||.|.||||||||...|.|:|.|| ||......|.|.|||||:|..|:||||..
  Rat   452 RVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKK 516

  Fly   442 LDI-DCNNFDFLDPPLEDGLRSAYKSLDALGAIKTGDDSYITPLGRQMVQYPLDPKYSKLLLTAS 505
            |.| |..:|||:|||..:.|..|.:.|:.|.|:  .||..:|.||..|.::||||:.:|:::.:.
  Rat   517 LGIDDLVHFDFMDPPAPETLMRALELLNYLAAL--NDDGDLTELGSMMAEFPLDPQLAKMVIASC 579

  Fly   506 SFGCMEEILSLVSVLSSDHVFVSNSEKNEMAALAHAKFQSKHGDHLTLLNVFNGFLKSEKPKMWC 570
            .:.|..|:||:.::||....||..:|..:.|..|..:|....|||||||||::.|.::.:...||
  Rat   580 DYNCSNEVLSITAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWC 644

  Fly   571 HDNYLNLRSLTYARNVRRQLREISEHLHLALNSSDDIEM-----LKKCILNGFFENIAVLQRDGF 630
            :||::|.|||..|.|||:||..|.:..:|...|:|....     ::|.::.|:|..:|.|:|.|.
  Rat   645 YDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGH 709

  Fly   631 YITASGNIRSKIHPSSVLHGKYKPSYILFTEIVQTEQTFLRQVTEISIEWIKEVVP 686
            |:|...|...::|||:||  .:||.::|:.|.|.|.:.::|..|:|..||:.::.|
  Rat   710 YLTVKDNQVVQLHPSTVL--DHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAP 763

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4901NP_001334733.1 None
Dhx15NP_001178526.1 HrpA 124..763 CDD:224557 267/651 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53574
OrthoDB 1 1.010 - - D354219at2759
OrthoFinder 1 1.000 - - FOG0000059
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100085
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.730

Return to query results.
Submit another query.