DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4901 and Dhx40

DIOPT Version :9

Sequence 1:NP_001334733.1 Gene:CG4901 / 34357 FlyBaseID:FBgn0032194 Length:694 Species:Drosophila melanogaster
Sequence 2:NP_001005873.1 Gene:Dhx40 / 287595 RGDID:1359618 Length:779 Species:Rattus norvegicus


Alignment Length:686 Identity:254/686 - (37%)
Similarity:390/686 - (56%) Gaps:59/686 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 PILLTSKRTS----IEQQQK-----------SLPVFNCRHRILKELEANDTVLIMSETGSGKTTQ 100
            |:.|..:|.|    .::::|           :.|:...|.::::.:..|..:::...||||||||
  Rat    21 PVELQEERPSAVRIADREEKGCTSQEGGTTPTFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQ 85

  Fly   101 IPQFLLLAGYAKNGMIGITQPRRVAAITVARRVAQELNGTIGDTVGYTVRFEDVTSRATKIRFLT 165
            :|::|..||::::||||:||||:||||:||:|||:|:..|:|..|||.|||:|.:|:.|.|:::|
  Rat    86 LPKYLYEAGFSQHGMIGVTQPRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMT 150

  Fly   166 DGVLLRESIKDRLLLKYSVIILDEAHERTVNADLLFGIVKDAQKERRKQKLANLKVVVTSATMDI 230
            ||.||:..:.|..|.|:||||||||||||:..|:|||::|...:::...:..:|||||.||||::
  Rat   151 DGCLLKHILGDPNLNKFSVIILDEAHERTLTTDILFGLLKKLFQDKSPNRKEHLKVVVMSATMEL 215

  Fly   231 DHFGNYF-NCKGMYLEGRTYPVR------VMHTKEEHEDYIHTVLVTLFHIHRTTPKNHDVLIFL 288
            .....:| ||....:.||.||||      :.....|:..||..::.....||...... |:|:||
  Rat   216 AKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAG-DILVFL 279

  Fly   289 TGQEEIESLAQQIRQLAK-----IDTTGTT--DLRVFTLYAQLSQGKQLECFVPTPANVRKVILA 346
            |||.|||...:.:.|:|:     .|...||  .|.:...|..::..:|...|:|.|..:||.:::
  Rat   280 TGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVIS 344

  Fly   347 TNIAETSITIPGIRCVIDCGFVKEKSFNTVDGLDVLKSVRISKAQAWQRAGRAGRDADGTCYRAY 411
            |||:.||:||.|||.|:|.||||:.:.|...|||:|:.|.|||::|.||:|||||.|.|.|:|.|
  Rat   345 TNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTASGKCFRIY 409

  Fly   412 TKAEMDS-FADATQPEILRTNPTSMVLQLLALDI-DCNNFDFLDPPLEDGLRSAYKSLDALGAI- 473
            :|...:. ..|...|||.||:.||:||.|..|.| |...|.:||||.|..:..|.|.|....|| 
  Rat   410 SKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQCDAID 474

  Fly   474 KTGDDSYITPLGRQMVQYPLDPKYSKLLLTASSFGCMEEILSLVSVLSSDHVFVS--NSEKNEMA 536
            ::|   ::|.||..||::||.|..:..::.|:|..|.:.:|.:.::||.::||:.  :.|..:.|
  Rat   475 RSG---HVTRLGLSMVEFPLPPHLTCAVIRAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEA 536

  Fly   537 ALAHAKFQSKHG---DHLTLLNVFNGFLKSEKPKMWCHDNYLNLRSLTYARNVRRQLREISEHLH 598
            ...|.:..:|.|   |..||..:|.....|..|..||..::::.|.|..|..|..||||:...|.
  Rat   537 EQKHRELAAKAGGFNDFATLAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLK 601

  Fly   599 LALNSSD---------DIEMLKKCILNGFFENIAVLQRDGFYITASGNIRSK---IHPSSVLH-G 650
               ..||         ..|:|::|:..|:|:|:|.......:.|..|  |..   |||||.|| .
  Rat   602 ---QQSDFPRETFEGPKHEVLRRCLCAGYFKNVARRSVGRTFCTMDG--RGSPVHIHPSSALHEQ 661

  Fly   651 KYKPSYILFTEIVQTEQTFLRQVTEISIEWIKEVVP 686
            :.|..:|:|.|::.|.:.:.|.|..|..||:::::|
  Rat   662 ETKLEWIIFHEVLVTTKVYARIVCPIRYEWVRDLLP 697

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4901NP_001334733.1 None
Dhx40NP_001005873.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..53 5/31 (16%)
HrpA 51..750 CDD:224557 249/656 (38%)
DEAH box 173..176 2/2 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D354219at2759
OrthoFinder 1 1.000 - - FOG0000059
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

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