DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4901 and SPAC20H4.09

DIOPT Version :9

Sequence 1:NP_001334733.1 Gene:CG4901 / 34357 FlyBaseID:FBgn0032194 Length:694 Species:Drosophila melanogaster
Sequence 2:NP_593629.1 Gene:SPAC20H4.09 / 2542874 PomBaseID:SPAC20H4.09 Length:647 Species:Schizosaccharomyces pombe


Alignment Length:654 Identity:246/654 - (37%)
Similarity:375/654 - (57%) Gaps:41/654 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 IAPILLTSKRTSIEQQQKSLPVFNCRHRILKELEANDTVLIMSETGSGKTTQIPQFLLLAGYA-K 112
            |:..|.|...|.:..|:|.||:...|:::|..:|.|...:::..||.||||||||||..||:| :
pombe     6 ISQSLSTLTNTPLNIQKKLLPITKYRNQLLYAVEQNQITIVLGHTGCGKTTQIPQFLYEAGWASQ 70

  Fly   113 NGMIGITQPRRVAAITVARRVAQELNGTIGDTVGYTVRFEDVTSRATKIRFLTDGVLLRESIKDR 177
            ||:||.|||||:.|.:|:.||:.|||...|...||:::|:...|..|||:::|||:||.|...|.
pombe    71 NGIIGCTQPRRLVAKSVSERVSLELNSPPGSLCGYSIQFDHNVSEKTKIKYMTDGILLNEIFFDP 135

  Fly   178 LLLKYSVIILDEAHERTVNADLLFGIVKDAQKERRKQKLANLKVVVTSATMDIDHFGNYFN---- 238
            ||.:||::||||.||||::.|||.|::|     |..:|..:.::|::||::|.:....:|.    
pombe   136 LLERYSIVILDEVHERTLSTDLLLGVLK-----RILEKRNDFRLVLSSASVDANKLSQFFGQDKV 195

  Fly   239 CKGMYLEGRTYPVRVMHTKEEHEDYIHTVLVTLFHIHRTTPKNHDVLIFLTGQEEIESLAQQIRQ 303
            |. |.:||:.:||..:..::..|:|:.:.:.|:.:|:.|.|.. |:|:||:|::|||...::|..
pombe   196 CT-MSIEGKLFPVETLFLQKPTENYVDSAIETVININSTYPPG-DILVFLSGRKEIEYCIKKIED 258

  Fly   304 LAKIDTTGTTDLRVFTLYAQLSQGKQLECFVPTPANVRKVILATNIAETSITIPGIRCVIDCGFV 368
            .....:.....|....|:|.|:..:|:..|.....:.||||.:||||||||||.||..|:|.||.
pombe   259 SLIHASEDCQTLVPLPLHAGLTVDEQMRVFNIYDGDFRKVIFSTNIAETSITIDGIVYVVDSGFN 323

  Fly   369 KEKSFNTVDGLDVLKSVRISKAQAWQRAGRAGRDADGTCYRAYTKAEMDSFADATQPEILRTNPT 433
            |::.:|.......|.:|.|||:.|.||:|||||...|..:|.||:.......:..:.:||..:.:
pombe   324 KQRIYNPYTRTSKLINVPISKSSAIQRSGRAGRTMRGKVFRLYTEKAYSLMKEEFEADILNCDMS 388

  Fly   434 SMVLQLLALDI-DCNNFDFLDPPLEDGLRSAYKSLDALGAIKTGDDS--YITPLGRQMVQYPLDP 495
            .:||.|..|.: :...|.|...|....|.:|.:.|..||.:   |:|  ...|||.|:....||.
pombe   389 PLVLFLKGLGLKNILQFPFFVRPPTVHLMAALEDLYLLGVL---DESGNLTDPLGIQISNSFLDA 450

  Fly   496 KYSKLLLTASSFGCMEEILSLVSVLSSDHVFV--SNSEKNEMAALAHAKFQSKHGDHLTLLNVFN 558
            ..||.|||::.|||..||||:.|:|::..||.  ::|.||: |.:||:.|.:..||.:|.||||.
pombe   451 NISKALLTSNQFGCTHEILSIASILTAGEVFYNPTSSSKND-AFVAHSSFFANEGDIITALNVFE 514

  Fly   559 GFLKSEKPKMWCHDNYLNLRSLTYARNVRRQLREISEHLHLALNS----------SDDIEMLKKC 613
            .|:.::|...||..||||.::|       ||..:|..||...||.          |.|...:.||
pombe   515 SFVGNKKDLQWCRKNYLNYQTL-------RQALDIRTHLVRFLNKFSIPTAQRLPSSDCSKILKC 572

  Fly   614 ILNGFFENIAVLQRDGFYITASGNIRSKIHPSSVLHGKYKPSYILFTEIVQTE-QTFLRQVTEIS 677
            :|:||..|:|.||.||.|.|..|. :..:..|||||.|..| :|:::..|::| |.|::.:::|.
pombe   573 LLDGFVRNVAHLQNDGSYKTIGGK-QVWLDSSSVLHEKKTP-WIMYSSAVESETQIFVKNISKIE 635

  Fly   678 IEWI 681
            ..|:
pombe   636 SFWL 639

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4901NP_001334733.1 None
SPAC20H4.09NP_593629.1 DEXDc 16..208 CDD:214692 84/197 (43%)
DEXDc 42..179 CDD:238005 66/141 (47%)
Helicase_C 221..356 CDD:278689 52/135 (39%)
HA2 426..510 CDD:214852 36/87 (41%)
OB_NTP_bind <569..639 CDD:285018 27/71 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53574
OrthoFinder 1 1.000 - - FOG0000059
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100085
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.720

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