DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4901 and prp16

DIOPT Version :9

Sequence 1:NP_001334733.1 Gene:CG4901 / 34357 FlyBaseID:FBgn0032194 Length:694 Species:Drosophila melanogaster
Sequence 2:NP_595890.2 Gene:prp16 / 2540006 PomBaseID:SPBC1711.17 Length:1173 Species:Schizosaccharomyces pombe


Alignment Length:679 Identity:258/679 - (37%)
Similarity:402/679 - (59%) Gaps:45/679 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 GPSPVKFSFKRKYDAMANSPILEKKPHVAQIKQTIAPILLTSKRTSIEQQQKSLPVFNCRHRILK 79
            |.:|||.:.:.:   .:|    :|....|:.|             |..:|::.||.|..|.::|.
pombe   459 GTTPVKVAGRSE---QSN----KKDTEFARTK-------------SYREQREFLPAFAVREQLLS 503

  Fly    80 ELEANDTVLIMSETGSGKTTQIPQFLLLAGYAKNGMIGITQPRRVAAITVARRVAQELNGTIGDT 144
            .:..|..::::.|||||||||:.|||...||.:|||||.||||||||::||:||::|:...:|.|
pombe   504 VIRDNQVLIVVGETGSGKTTQLAQFLYEDGYHRNGMIGCTQPRRVAAMSVAKRVSEEMGVRLGST 568

  Fly   145 VGYTVRFEDVTSRATKIRFLTDGVLLRESIKDRLLLKYSVIILDEAHERTVNADLLFGIVKDAQK 209
            |||::||||||...|.|:::|||||||||:....|.||||||:||||||::|.|:|.|::|....
pombe   569 VGYSIRFEDVTGPDTVIKYMTDGVLLRESLMQNNLEKYSVIIMDEAHERSLNTDILMGLLKKVLS 633

  Fly   210 ERRKQKLANLKVVVTSATMDIDHFGNYFNCKGMY-LEGRTYPVRVMHTKEEHEDYIHTVLVTLFH 273
            .||     ::|::||||||:...|.::|.....: :.||||||.:|..|....||:...:..:..
pombe   634 RRR-----DIKLLVTSATMNSQKFSDFFGGAPQFTIPGRTYPVDIMFAKAPCSDYVEAAVRQVLQ 693

  Fly   274 IHRTTPKNHDVLIFLTGQEEIES----LAQQIRQLAKIDTTGTTDLRVFTLYAQLSQGKQLECFV 334
            ||.:.|.. |:|:|:||||:||:    :|.::.||     .....|.:..:|:|:....|.:.|.
pombe   694 IHLSQPAG-DILVFMTGQEDIEATCEIIADRLNQL-----HDAPRLSILPIYSQMPADLQAKIFD 752

  Fly   335 PTPANVRKVILATNIAETSITIPGIRCVIDCGFVKEKSFNTVDGLDVLKSVRISKAQAWQRAGRA 399
            .....||||::||||||||:|:.||..|:|.|:.|.|.:|:..|:|.|:...||:|.|.||||||
pombe   753 SAEPGVRKVVVATNIAETSLTVHGISYVVDTGYCKLKMYNSKLGIDTLQVTPISQANANQRAGRA 817

  Fly   400 GRDADGTCYRAYTK-AEMDSFADATQPEILRTNPTSMVLQLLALDI-DCNNFDFLDPPLEDGLRS 462
            ||...|..||.||: |.:....:.|.|||.|||.::.||.|.:|.: :.::|||:|.|..|.|.:
pombe   818 GRTGPGIAYRLYTEMAYIREMFETTLPEIQRTNLSNTVLILKSLGVEEISDFDFMDRPPNDTLMA 882

  Fly   463 AYKSLDALGAIKTGDDSY--ITPLGRQMVQYPLDPKYSKLLLTASSFGCMEEILSLVSVLSSDHV 525
            :...|..|||:    |::  :|.||::|..:|:||..|||::.|..:.|.|||:::||:||...|
pombe   883 SLYELWTLGAL----DNFGKLTTLGKKMSLFPMDPSLSKLIIIAEDYKCTEEIITIVSMLSVPSV 943

  Fly   526 FVSNSEKNEMAALAHAKFQSKHGDHLTLLNVFNGFLKSEKPKMWCHDNYLNLRSLTYARNVRRQL 590
            |....|:.|.:..|..||.....|||.|||::..:.::.....||..::|:.::|..||::|:||
pombe   944 FYRPKERAEESDAAREKFNVPESDHLMLLNIYQHWQRNGYSNSWCSKHFLHSKTLKRARDIRQQL 1008

  Fly   591 REISEHLHLALNSSDDIEMLKKCILNGFFENIAVLQRDGFYITASGNIRSKIHPSSVLHG-KYKP 654
            .||.....::|.|..|.:::::.:.:.:|...|..:..|.|:.....:...:|.:|.|:| .|.|
pombe  1009 VEIMSKQKISLESVSDWDIVRRVLCSAYFHQAACAKGIGEYVHLRSGMPCHLHVTSSLYGLGYLP 1073

  Fly   655 SYILFTEIVQTEQTFLRQVTEISIEWIKE 683
            .|:::.|:|.|.:.::..||.:...|:.|
pombe  1074 DYVIYHELVLTSKEYMNIVTSVDPYWLAE 1102

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4901NP_001334733.1 None
prp16NP_595890.2 DEXDc 487..673 CDD:214692 96/190 (51%)
DEXDc 509..647 CDD:238005 79/142 (56%)
HELICc 718..821 CDD:197757 44/107 (41%)
HA2 890..972 CDD:214852 33/85 (39%)
OB_NTP_bind 998..1107 CDD:285018 29/105 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000059
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100085
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.710

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