DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4901 and Dhx8

DIOPT Version :9

Sequence 1:NP_001334733.1 Gene:CG4901 / 34357 FlyBaseID:FBgn0032194 Length:694 Species:Drosophila melanogaster
Sequence 2:NP_659080.2 Gene:Dhx8 / 217207 MGIID:1306823 Length:1244 Species:Mus musculus


Alignment Length:646 Identity:271/646 - (41%)
Similarity:401/646 - (62%) Gaps:17/646 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 KRT--SIEQQQKSLPVFNCRHRILKELEANDTVLIMSETGSGKTTQIPQFLLLAGYAKNGMIGIT 119
            |:|  ||.:|::|||::..:.::::.:..|..::::.||||||||||.|:|..|||...|.||.|
Mouse   576 KKTQMSILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCT 640

  Fly   120 QPRRVAAITVARRVAQELNGTIGDTVGYTVRFEDVTSRATKIRFLTDGVLLRESIKDRLLLKYSV 184
            |||||||::||:||::|....:|..||||:||||.||..|.|:::|||:||||.:.|..|.:|::
Mouse   641 QPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAI 705

  Fly   185 IILDEAHERTVNADLLFGIVKDAQKERRKQKLANLKVVVTSATMDIDHFGNYFNCKGMY-LEGRT 248
            |:||||||||::.|:|||::|     :..||..::|::|||||:|...|..||....:: :.|||
Mouse   706 IMLDEAHERTIHTDVLFGLLK-----KTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRT 765

  Fly   249 YPVRVMHTKEEHEDYIHTVLVTLFHIHRTTPKNHDVLIFLTGQEEIESLAQQIRQLAKIDTTGTT 313
            |||.:::|||...||:...|:|:..||.|.|.. |:|:||||||||::..:.:.:..|.......
Mouse   766 YPVEILYTKEPETDYLDASLITVMQIHLTEPPG-DILVFLTGQEEIDTACEILYERMKSLGPDVP 829

  Fly   314 DLRVFTLYAQLSQGKQLECFVPTPANVRKVILATNIAETSITIPGIRCVIDCGFVKEKSFNTVDG 378
            :|.:..:|:.|....|...|.|.|...|||::||||||||:||.||..|:|.||||:|.:|:..|
Mouse   830 ELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTG 894

  Fly   379 LDVLKSVRISKAQAWQRAGRAGRDADGTCYRAYT-KAEMDSFADATQPEILRTNPTSMVLQLLAL 442
            :|.|....||:|||.||||||||...|.|||.|| :|..|.......|||.|||..|.||.|.|:
Mouse   895 IDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAM 959

  Fly   443 DI-DCNNFDFLDPPLEDGLRSAYKSLDALGAIKTGDDSYITPLGRQMVQYPLDPKYSKLLLTASS 506
            .| |..:|||:|.|..:.|.:|.:.|..|||:  .|:..:|.|||:|.::||:|...|:|:.:..
Mouse   960 GINDLLSFDFMDAPPMETLITAMEQLYTLGAL--DDEGLLTRLGRRMAEFPLEPMLCKMLIMSVH 1022

  Fly   507 FGCMEEILSLVSVLSSDHVFVSNSEKNEMAALAHAKFQSKHGDHLTLLNVFNGFLKSEKPKMWCH 571
            .||.||:|::||:||..:||....:|..:|....|||....|||||||.|:|.:..::....||:
Mouse  1023 LGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCY 1087

  Fly   572 DNYLNLRSLTYARNVRRQLREISEHLHL-ALNSSDDIEMLKKCILNGFFENIAVLQRDGFYITAS 635
            :|::..|||..|:::|:|:..|.:...| .::.......::|.|.:|||.|.|.......|.|..
Mouse  1088 ENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLI 1152

  Fly   636 GNIRSKIHPSSVLHGKYKPSYILFTEIVQTEQTFLRQVTEISIEWIKEVVP--FVKNIPTR 694
            ......|||||.|..: :|.::::.|:|.|.:.::|:||.|...|:.|..|  |..:.||:
Mouse  1153 DQQVVYIHPSSALFNR-QPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTK 1212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4901NP_001334733.1 None
Dhx8NP_659080.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 152..289
S1_DHX8_helicase 289..367 CDD:240189
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 361..396
DEXDc 585..770 CDD:214692 91/189 (48%)
DEXDc 606..744 CDD:238005 75/142 (53%)
DEAH box 709..712 2/2 (100%)
HELICc 769..926 CDD:238034 71/157 (45%)
HA2 988..1070 CDD:214852 35/83 (42%)
OB_NTP_bind 1104..1203 CDD:285018 28/99 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53574
OrthoDB 1 1.010 - - D354219at2759
OrthoFinder 1 1.000 - - FOG0000059
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100085
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.730

Return to query results.
Submit another query.