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Protein Alignment ath and mog-1

DIOPT Version :10

Sequence 1:	NP_609356.2	Gene:	ath / 34357	FlyBaseID:	FBgn0032194	Length:	694	Species:	Drosophila melanogaster
Sequence 2:	NP_499212.1	Gene:	mog-1 / 176409	WormBaseID:	WBGene00003389	Length:	1131	Species:	Caenorhabditis elegans

Alignment Length:	640	Identity:	268/640 - (41%)
Similarity:	399/640 - (62%)	Gaps:	19/640 - (2%)

- Green bases have known domain annotations that are detailed below.

  Fly    60 SIEQQQKSLPVFNCRHRILKELEANDTVLIMSETGSGKTTQIPQFLLLAGYAKNGMIGITQPRRV 124
            ||:||::.||||.||.:::..:..|:.|:|:.|||||||||:.|:||..|:..:|:||.||||||
Worm   433 SIKQQREYLPVFACRQKMMNVIRENNVVIIVGETGSGKTTQLAQYLLEDGFGDSGLIGCTQPRRV 497

  Fly   125 AAITVARRVAQELNGTIGDTVGYTVRFEDVTSRATKIRFLTDGVLLRESIKDRLLLKYSVIILDE 189
            ||::||||||.|:...:|..|||.:||||.||..|.|:::|||:||||.:.|..|.:||.||:||
Worm   498 AAMSVARRVADEMGVDLGQDVGYAIRFEDCTSEKTIIKYMTDGILLRECLGDGSLDQYSAIIMDE 562

  Fly   190 AHERTVNADLLFGIVKDAQKERRKQKLANLKVVVTSATMDIDHFGNYF--NCKGMYLEGRTYPVR 252
            ||||::|.|:|||::::...:|     |:||::|||||||.|.|.::|  ||....:.|||:||.
Worm   563 AHERSLNTDVLFGLLREVIAKR-----ADLKLIVTSATMDADKFADFFGGNCPTFTIPGRTFPVE 622

  Fly   253 VMHTKEEHEDYIHTVLVTLFHIHRTTPKNHDVLIFLTGQEEIESLAQQIRQ-LAKIDTTGTTDLR 316
            :.|.:...|||:...:.....|| ....:.|:|||:.|||:||...:.|:: |.::|.  ...|.
Worm   623 LFHARTPVEDYVDAAVKQAVTIH-LGGMDGDILIFMPGQEDIECTCEMIKEKLGELDE--APPLA 684

  Fly   317 VFTLYAQLSQGKQLECFVPTPANVRKVILATNIAETSITIPGIRCVIDCGFVKEKSFNTVDGLDV 381
            |..:|:||....|.:.|...|..:||.|:||||||||:|:.||..|||.||.|.|.:|...|:|.
Worm   685 VLPIYSQLPSDLQAKIFQRAPGGMRKAIVATNIAETSLTVDGILFVIDPGFCKMKVYNPRIGMDA 749

  Fly   382 LKSVRISKAQAWQRAGRAGRDADGTCYRAYTKAEM-DSFADATQPEILRTNPTSMVLQLLALDI- 444
            |....:|:|.|.||.|||||...|.|||.||:.:. |....:|.|||.|||..::||.|.:|.:
Worm   750 LSIFPVSQASANQRTGRAGRTGPGQCYRLYTERQFKDELLKSTVPEIQRTNLANVVLLLKSLGVD 814

  Fly   445 DCNNFDFLDPPLEDGLRSAYKSLDALGAI-KTGDDSYITPLGRQMVQYPLDPKYSKLLLTASSFG 508
            |...|.|:|.|.:|.:.::...|..|||: .||.   :||:||:||::||||..||:|:.::..|
Worm   815 DLLKFHFMDAPPQDNMLNSMYQLWTLGALDNTGQ---LTPMGRKMVEFPLDPTLSKMLIMSAEMG 876

  Fly   509 CMEEILSLVSVLSSDHVFVSNSEKNEMAALAHAKFQSKHGDHLTLLNVFNGFLKSEKPKMWCHDN 573
            |.:|:|::||:||...:|.....:.|.|.....|||....||||.|||:..:...:....||.||
Worm   877 CSDEVLTIVSMLSVPAIFFRPKGREEEADAKKEKFQVPESDHLTFLNVYIQWRTHKYSAKWCADN 941

  Fly   574 YLNLRSLTYARNVRRQLREISEHLHLAL-NSSDDIEMLKKCILNGFFENIAVLQRDGFYITASGN 637
            ||::::|...|.||.||:||.:.|.|.| ::..:.::::|||.:.:|.|.|.|:..|.|:.....
Worm   942 YLHVKALKKVREVRAQLKEIMQDLKLPLISNGSEWDIVRKCICSAYFHNAARLKGIGEYVNVRTG 1006

  Fly   638 IRSKIHPSSVLHGK-YKPSYILFTEIVQTEQTFLRQVTEISIEWIKEVVPFVKNI 691
            |...:||:|.|.|. :.|.|:::.|::.|.:.:::.||.:...|:.|:.|...:|
Worm  1007 IPCFLHPTSALFGMGFMPDYVVYHELIMTAKEYMQCVTAVDAIWLAELGPMFYSI 1061

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.